Protein–RNA interactions for Protein: Q9NPL8

TIMMDC1, Complex I assembly factor TIMMDC1, mitochondrial, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMMDC1Q9NPL8 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TIMMDC1Q9NPL8 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TIMMDC1Q9NPL8 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
TIMMDC1Q9NPL8 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TIMMDC1Q9NPL8 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TIMMDC1Q9NPL8 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TIMMDC1Q9NPL8 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TIMMDC1Q9NPL8 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TIMMDC1Q9NPL8 AL024508.2-201ENST00000607749 1894 ntBASIC16.65■□□□□ 0.26
TIMMDC1Q9NPL8 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TIMMDC1Q9NPL8 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TIMMDC1Q9NPL8 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.65■□□□□ 0.26
TIMMDC1Q9NPL8 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TIMMDC1Q9NPL8 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TIMMDC1Q9NPL8 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TIMMDC1Q9NPL8 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TIMMDC1Q9NPL8 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.65■□□□□ 0.26
TIMMDC1Q9NPL8 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TIMMDC1Q9NPL8 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.65■□□□□ 0.26
TIMMDC1Q9NPL8 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TIMMDC1Q9NPL8 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TIMMDC1Q9NPL8 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.65■□□□□ 0.26
TIMMDC1Q9NPL8 TSPY12P-201ENST00000421279 868 ntBASIC16.65■□□□□ 0.26
TIMMDC1Q9NPL8 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TIMMDC1Q9NPL8 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TIMMDC1Q9NPL8 RN7SL606P-201ENST00000472779 293 ntBASIC16.65■□□□□ 0.26
TIMMDC1Q9NPL8 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.65■□□□□ 0.26
TIMMDC1Q9NPL8 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TIMMDC1Q9NPL8 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.65■□□□□ 0.26
TIMMDC1Q9NPL8 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TIMMDC1Q9NPL8 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.65■□□□□ 0.26
TIMMDC1Q9NPL8 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.65■□□□□ 0.26
TIMMDC1Q9NPL8 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.65■□□□□ 0.26
TIMMDC1Q9NPL8 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TIMMDC1Q9NPL8 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TIMMDC1Q9NPL8 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TIMMDC1Q9NPL8 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TIMMDC1Q9NPL8 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TIMMDC1Q9NPL8 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.65■□□□□ 0.26
TIMMDC1Q9NPL8 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TIMMDC1Q9NPL8 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TIMMDC1Q9NPL8 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TIMMDC1Q9NPL8 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.65■□□□□ 0.26
TIMMDC1Q9NPL8 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TIMMDC1Q9NPL8 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TIMMDC1Q9NPL8 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TIMMDC1Q9NPL8 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
TIMMDC1Q9NPL8 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TIMMDC1Q9NPL8 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TIMMDC1Q9NPL8 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TIMMDC1Q9NPL8 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
TIMMDC1Q9NPL8 AC233702.3-201ENST00000578656 1387 ntBASIC16.64■□□□□ 0.26
TIMMDC1Q9NPL8 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
TIMMDC1Q9NPL8 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.64■□□□□ 0.26
TIMMDC1Q9NPL8 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TIMMDC1Q9NPL8 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.64■□□□□ 0.25
TIMMDC1Q9NPL8 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.64■□□□□ 0.25
TIMMDC1Q9NPL8 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TIMMDC1Q9NPL8 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TIMMDC1Q9NPL8 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.64■□□□□ 0.25
TIMMDC1Q9NPL8 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TIMMDC1Q9NPL8 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TIMMDC1Q9NPL8 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TIMMDC1Q9NPL8 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.64■□□□□ 0.25
TIMMDC1Q9NPL8 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
TIMMDC1Q9NPL8 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.64■□□□□ 0.25
TIMMDC1Q9NPL8 TPM4P1-201ENST00000436100 807 ntBASIC16.64■□□□□ 0.25
TIMMDC1Q9NPL8 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.64■□□□□ 0.25
TIMMDC1Q9NPL8 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TIMMDC1Q9NPL8 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TIMMDC1Q9NPL8 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TIMMDC1Q9NPL8 AC074051.2-201ENST00000565115 352 ntBASIC16.64■□□□□ 0.25
TIMMDC1Q9NPL8 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TIMMDC1Q9NPL8 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TIMMDC1Q9NPL8 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.64■□□□□ 0.25
TIMMDC1Q9NPL8 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TIMMDC1Q9NPL8 AC099343.3-201ENST00000605834 2503 ntBASIC16.64■□□□□ 0.25
TIMMDC1Q9NPL8 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TIMMDC1Q9NPL8 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TIMMDC1Q9NPL8 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TIMMDC1Q9NPL8 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TIMMDC1Q9NPL8 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TIMMDC1Q9NPL8 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TIMMDC1Q9NPL8 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TIMMDC1Q9NPL8 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TIMMDC1Q9NPL8 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TIMMDC1Q9NPL8 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TIMMDC1Q9NPL8 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TIMMDC1Q9NPL8 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TIMMDC1Q9NPL8 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TIMMDC1Q9NPL8 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TIMMDC1Q9NPL8 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.63■□□□□ 0.25
TIMMDC1Q9NPL8 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TIMMDC1Q9NPL8 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TIMMDC1Q9NPL8 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TIMMDC1Q9NPL8 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TIMMDC1Q9NPL8 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
TIMMDC1Q9NPL8 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TIMMDC1Q9NPL8 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TIMMDC1Q9NPL8 AC111152.3-201ENST00000569699 673 ntBASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms