Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.04■□□□□ 0.8
EFCC1Q9HA90 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EFCC1Q9HA90 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
EFCC1Q9HA90 AC009053.2-201ENST00000563701 2365 ntBASIC20.04■□□□□ 0.8
EFCC1Q9HA90 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EFCC1Q9HA90 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EFCC1Q9HA90 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC20.04■□□□□ 0.8
EFCC1Q9HA90 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
EFCC1Q9HA90 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.04■□□□□ 0.8
EFCC1Q9HA90 AC055876.3-201ENST00000431496 288 ntBASIC20.04■□□□□ 0.8
EFCC1Q9HA90 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC20.04■□□□□ 0.8
EFCC1Q9HA90 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
EFCC1Q9HA90 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
EFCC1Q9HA90 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC20.04■□□□□ 0.8
EFCC1Q9HA90 DUX4L17-201ENST00000557360 1267 ntBASIC20.04■□□□□ 0.8
EFCC1Q9HA90 NAA60-208ENST00000570819 833 ntTSL 2 BASIC20.04■□□□□ 0.8
EFCC1Q9HA90 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC20.04■□□□□ 0.8
EFCC1Q9HA90 AC138649.4-201ENST00000612222 287 ntBASIC20.04■□□□□ 0.8
EFCC1Q9HA90 MED16-214ENST00000617672 554 ntTSL 5 BASIC20.04■□□□□ 0.8
EFCC1Q9HA90 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC20.04■□□□□ 0.8
EFCC1Q9HA90 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
EFCC1Q9HA90 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
EFCC1Q9HA90 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
EFCC1Q9HA90 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EFCC1Q9HA90 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
EFCC1Q9HA90 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
EFCC1Q9HA90 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.04■□□□□ 0.8
EFCC1Q9HA90 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
EFCC1Q9HA90 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
EFCC1Q9HA90 AC009949.1-201ENST00000623048 1830 ntBASIC20.04■□□□□ 0.8
EFCC1Q9HA90 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
EFCC1Q9HA90 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
EFCC1Q9HA90 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
EFCC1Q9HA90 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EFCC1Q9HA90 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
EFCC1Q9HA90 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EFCC1Q9HA90 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.03■□□□□ 0.8
EFCC1Q9HA90 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EFCC1Q9HA90 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EFCC1Q9HA90 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EFCC1Q9HA90 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
EFCC1Q9HA90 NABP1-203ENST00000409510 843 ntTSL 5 BASIC20.03■□□□□ 0.8
EFCC1Q9HA90 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
EFCC1Q9HA90 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
EFCC1Q9HA90 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
EFCC1Q9HA90 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC20.03■□□□□ 0.8
EFCC1Q9HA90 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC20.03■□□□□ 0.8
EFCC1Q9HA90 YTHDF3-AS1-201ENST00000603538 718 ntBASIC20.03■□□□□ 0.8
EFCC1Q9HA90 AL008721.1-201ENST00000609964 604 ntBASIC20.03■□□□□ 0.8
EFCC1Q9HA90 AC009093.7-201ENST00000623853 1223 ntBASIC20.03■□□□□ 0.8
EFCC1Q9HA90 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC20.03■□□□□ 0.8
EFCC1Q9HA90 HCG11-201ENST00000411553 5696 ntBASIC20.03■□□□□ 0.8
EFCC1Q9HA90 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EFCC1Q9HA90 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
EFCC1Q9HA90 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
EFCC1Q9HA90 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.03■□□□□ 0.8
EFCC1Q9HA90 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
EFCC1Q9HA90 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EFCC1Q9HA90 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
EFCC1Q9HA90 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EFCC1Q9HA90 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
EFCC1Q9HA90 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
EFCC1Q9HA90 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
EFCC1Q9HA90 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
EFCC1Q9HA90 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
EFCC1Q9HA90 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
EFCC1Q9HA90 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.02■□□□□ 0.8
EFCC1Q9HA90 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
EFCC1Q9HA90 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
EFCC1Q9HA90 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
EFCC1Q9HA90 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC20.02■□□□□ 0.8
EFCC1Q9HA90 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC20.02■□□□□ 0.8
EFCC1Q9HA90 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
EFCC1Q9HA90 TFAMP1-201ENST00000412727 736 ntBASIC20.02■□□□□ 0.8
EFCC1Q9HA90 AL627223.1-201ENST00000416693 442 ntBASIC20.02■□□□□ 0.8
EFCC1Q9HA90 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC20.02■□□□□ 0.8
EFCC1Q9HA90 HNRNPA1P40-201ENST00000426371 1278 ntBASIC20.02■□□□□ 0.8
EFCC1Q9HA90 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
EFCC1Q9HA90 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC20.02■□□□□ 0.8
EFCC1Q9HA90 VPS29-207ENST00000549970 818 ntTSL 3 BASIC20.02■□□□□ 0.8
EFCC1Q9HA90 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC20.02■□□□□ 0.8
EFCC1Q9HA90 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC20.02■□□□□ 0.8
EFCC1Q9HA90 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC20.02■□□□□ 0.8
EFCC1Q9HA90 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC20.02■□□□□ 0.8
EFCC1Q9HA90 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.02■□□□□ 0.8
EFCC1Q9HA90 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.02■□□□□ 0.8
EFCC1Q9HA90 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
EFCC1Q9HA90 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
EFCC1Q9HA90 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
EFCC1Q9HA90 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
EFCC1Q9HA90 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
EFCC1Q9HA90 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
EFCC1Q9HA90 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
EFCC1Q9HA90 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
EFCC1Q9HA90 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
EFCC1Q9HA90 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
EFCC1Q9HA90 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
EFCC1Q9HA90 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
EFCC1Q9HA90 MST1L-201ENST00000442552 2185 ntBASIC20.01■□□□□ 0.79
EFCC1Q9HA90 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms