Protein–RNA interactions for Protein: Q9H9Z2

LIN28A, Protein lin-28 homolog A, humanhuman

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28AQ9H9Z2 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LIN28AQ9H9Z2 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LIN28AQ9H9Z2 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.66■□□□□ 0.26
LIN28AQ9H9Z2 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LIN28AQ9H9Z2 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.66■□□□□ 0.26
LIN28AQ9H9Z2 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LIN28AQ9H9Z2 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LIN28AQ9H9Z2 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.66■□□□□ 0.26
LIN28AQ9H9Z2 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
LIN28AQ9H9Z2 KRT17P6-201ENST00000453795 1220 ntBASIC16.66■□□□□ 0.26
LIN28AQ9H9Z2 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.66■□□□□ 0.26
LIN28AQ9H9Z2 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LIN28AQ9H9Z2 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.66■□□□□ 0.26
LIN28AQ9H9Z2 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.66■□□□□ 0.26
LIN28AQ9H9Z2 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.66■□□□□ 0.26
LIN28AQ9H9Z2 Z69720.1-201ENST00000601483 472 ntBASIC16.66■□□□□ 0.26
LIN28AQ9H9Z2 AC099336.1-202ENST00000602961 463 ntBASIC16.66■□□□□ 0.26
LIN28AQ9H9Z2 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.66■□□□□ 0.26
LIN28AQ9H9Z2 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.66■□□□□ 0.26
LIN28AQ9H9Z2 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.66■□□□□ 0.26
LIN28AQ9H9Z2 AC009154.2-201ENST00000621177 724 ntBASIC16.66■□□□□ 0.26
LIN28AQ9H9Z2 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.66■□□□□ 0.26
LIN28AQ9H9Z2 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LIN28AQ9H9Z2 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.66■□□□□ 0.26
LIN28AQ9H9Z2 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LIN28AQ9H9Z2 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LIN28AQ9H9Z2 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.66■□□□□ 0.26
LIN28AQ9H9Z2 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LIN28AQ9H9Z2 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LIN28AQ9H9Z2 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.65■□□□□ 0.26
LIN28AQ9H9Z2 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LIN28AQ9H9Z2 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
LIN28AQ9H9Z2 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LIN28AQ9H9Z2 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.65■□□□□ 0.26
LIN28AQ9H9Z2 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.65■□□□□ 0.26
LIN28AQ9H9Z2 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LIN28AQ9H9Z2 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.65■□□□□ 0.26
LIN28AQ9H9Z2 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LIN28AQ9H9Z2 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.65■□□□□ 0.26
LIN28AQ9H9Z2 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.65■□□□□ 0.26
LIN28AQ9H9Z2 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
LIN28AQ9H9Z2 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.65■□□□□ 0.26
LIN28AQ9H9Z2 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LIN28AQ9H9Z2 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.65■□□□□ 0.26
LIN28AQ9H9Z2 AC012615.1-201ENST00000565797 1299 ntBASIC16.65■□□□□ 0.26
LIN28AQ9H9Z2 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.65■□□□□ 0.26
LIN28AQ9H9Z2 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LIN28AQ9H9Z2 AL732292.2-201ENST00000609649 430 ntBASIC16.65■□□□□ 0.26
LIN28AQ9H9Z2 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.65■□□□□ 0.26
LIN28AQ9H9Z2 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
LIN28AQ9H9Z2 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LIN28AQ9H9Z2 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LIN28AQ9H9Z2 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LIN28AQ9H9Z2 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.65■□□□□ 0.26
LIN28AQ9H9Z2 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
LIN28AQ9H9Z2 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LIN28AQ9H9Z2 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LIN28AQ9H9Z2 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
LIN28AQ9H9Z2 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LIN28AQ9H9Z2 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.65■□□□□ 0.26
LIN28AQ9H9Z2 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
LIN28AQ9H9Z2 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
LIN28AQ9H9Z2 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.64■□□□□ 0.25
LIN28AQ9H9Z2 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
LIN28AQ9H9Z2 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
LIN28AQ9H9Z2 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LIN28AQ9H9Z2 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LIN28AQ9H9Z2 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
LIN28AQ9H9Z2 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LIN28AQ9H9Z2 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
LIN28AQ9H9Z2 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.64■□□□□ 0.25
LIN28AQ9H9Z2 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LIN28AQ9H9Z2 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LIN28AQ9H9Z2 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LIN28AQ9H9Z2 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LIN28AQ9H9Z2 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
LIN28AQ9H9Z2 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.64■□□□□ 0.25
LIN28AQ9H9Z2 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LIN28AQ9H9Z2 KRT18P65-201ENST00000439811 1286 ntBASIC16.64■□□□□ 0.25
LIN28AQ9H9Z2 MINOS1P3-201ENST00000457048 203 ntBASIC16.64■□□□□ 0.25
LIN28AQ9H9Z2 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.64■□□□□ 0.25
LIN28AQ9H9Z2 KRT126P-201ENST00000549467 1181 ntBASIC16.64■□□□□ 0.25
LIN28AQ9H9Z2 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.64■□□□□ 0.25
LIN28AQ9H9Z2 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LIN28AQ9H9Z2 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.64■□□□□ 0.25
LIN28AQ9H9Z2 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.64■□□□□ 0.25
LIN28AQ9H9Z2 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LIN28AQ9H9Z2 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LIN28AQ9H9Z2 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.64■□□□□ 0.25
LIN28AQ9H9Z2 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LIN28AQ9H9Z2 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LIN28AQ9H9Z2 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
LIN28AQ9H9Z2 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LIN28AQ9H9Z2 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.64■□□□□ 0.25
LIN28AQ9H9Z2 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LIN28AQ9H9Z2 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.64■□□□□ 0.25
LIN28AQ9H9Z2 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LIN28AQ9H9Z2 NSUN5P1-202ENST00000421140 1535 ntBASIC16.64■□□□□ 0.25
LIN28AQ9H9Z2 NSUN5P2-203ENST00000457352 1529 ntBASIC16.64■□□□□ 0.25
LIN28AQ9H9Z2 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms