Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.98■□□□□ 0.15
POLR2J3Q9H1A7 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
POLR2J3Q9H1A7 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.98■□□□□ 0.15
POLR2J3Q9H1A7 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
POLR2J3Q9H1A7 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
POLR2J3Q9H1A7 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
POLR2J3Q9H1A7 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.98■□□□□ 0.15
POLR2J3Q9H1A7 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
POLR2J3Q9H1A7 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
POLR2J3Q9H1A7 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
POLR2J3Q9H1A7 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
POLR2J3Q9H1A7 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.98■□□□□ 0.15
POLR2J3Q9H1A7 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.98■□□□□ 0.15
POLR2J3Q9H1A7 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
POLR2J3Q9H1A7 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.97■□□□□ 0.15
POLR2J3Q9H1A7 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
POLR2J3Q9H1A7 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.97■□□□□ 0.15
POLR2J3Q9H1A7 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
POLR2J3Q9H1A7 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
POLR2J3Q9H1A7 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
POLR2J3Q9H1A7 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
POLR2J3Q9H1A7 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
POLR2J3Q9H1A7 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.97■□□□□ 0.15
POLR2J3Q9H1A7 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
POLR2J3Q9H1A7 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
POLR2J3Q9H1A7 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
POLR2J3Q9H1A7 AC211429.1-201ENST00000415277 523 ntBASIC15.97■□□□□ 0.15
POLR2J3Q9H1A7 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.97■□□□□ 0.15
POLR2J3Q9H1A7 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC15.97■□□□□ 0.15
POLR2J3Q9H1A7 PPOX-219ENST00000544598 813 ntTSL 2 BASIC15.97■□□□□ 0.15
POLR2J3Q9H1A7 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC15.97■□□□□ 0.15
POLR2J3Q9H1A7 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC15.97■□□□□ 0.15
POLR2J3Q9H1A7 RBM42-202ENST00000586618 771 ntTSL 3 BASIC15.97■□□□□ 0.15
POLR2J3Q9H1A7 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.97■□□□□ 0.15
POLR2J3Q9H1A7 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.97■□□□□ 0.15
POLR2J3Q9H1A7 AL592071.1-201ENST00000611956 408 ntBASIC15.97■□□□□ 0.15
POLR2J3Q9H1A7 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC15.97■□□□□ 0.15
POLR2J3Q9H1A7 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
POLR2J3Q9H1A7 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
POLR2J3Q9H1A7 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
POLR2J3Q9H1A7 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
POLR2J3Q9H1A7 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.97■□□□□ 0.15
POLR2J3Q9H1A7 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
POLR2J3Q9H1A7 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.97■□□□□ 0.15
POLR2J3Q9H1A7 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
POLR2J3Q9H1A7 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
POLR2J3Q9H1A7 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
POLR2J3Q9H1A7 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
POLR2J3Q9H1A7 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
POLR2J3Q9H1A7 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
POLR2J3Q9H1A7 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
POLR2J3Q9H1A7 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
POLR2J3Q9H1A7 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
POLR2J3Q9H1A7 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.96■□□□□ 0.15
POLR2J3Q9H1A7 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
POLR2J3Q9H1A7 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
POLR2J3Q9H1A7 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
POLR2J3Q9H1A7 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.96■□□□□ 0.15
POLR2J3Q9H1A7 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
POLR2J3Q9H1A7 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
POLR2J3Q9H1A7 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
POLR2J3Q9H1A7 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
POLR2J3Q9H1A7 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC15.96■□□□□ 0.15
POLR2J3Q9H1A7 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC15.96■□□□□ 0.15
POLR2J3Q9H1A7 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC15.96■□□□□ 0.15
POLR2J3Q9H1A7 AC011840.4-201ENST00000578471 627 ntBASIC15.96■□□□□ 0.15
POLR2J3Q9H1A7 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC15.96■□□□□ 0.15
POLR2J3Q9H1A7 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
POLR2J3Q9H1A7 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.96■□□□□ 0.15
POLR2J3Q9H1A7 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.96■□□□□ 0.15
POLR2J3Q9H1A7 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
POLR2J3Q9H1A7 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
POLR2J3Q9H1A7 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
POLR2J3Q9H1A7 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
POLR2J3Q9H1A7 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
POLR2J3Q9H1A7 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.96■□□□□ 0.14
POLR2J3Q9H1A7 AL049757.1-201ENST00000616842 1596 ntBASIC15.96■□□□□ 0.14
POLR2J3Q9H1A7 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
POLR2J3Q9H1A7 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
POLR2J3Q9H1A7 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
POLR2J3Q9H1A7 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
POLR2J3Q9H1A7 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.95■□□□□ 0.14
POLR2J3Q9H1A7 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
POLR2J3Q9H1A7 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.95■□□□□ 0.14
POLR2J3Q9H1A7 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
POLR2J3Q9H1A7 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.95■□□□□ 0.14
POLR2J3Q9H1A7 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.95■□□□□ 0.14
POLR2J3Q9H1A7 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
POLR2J3Q9H1A7 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
POLR2J3Q9H1A7 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
POLR2J3Q9H1A7 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
POLR2J3Q9H1A7 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
POLR2J3Q9H1A7 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.95■□□□□ 0.14
POLR2J3Q9H1A7 AC104076.2-201ENST00000448912 469 ntBASIC15.95■□□□□ 0.14
POLR2J3Q9H1A7 AL136038.3-201ENST00000561909 1096 ntBASIC15.95■□□□□ 0.14
POLR2J3Q9H1A7 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.95■□□□□ 0.14
POLR2J3Q9H1A7 STK25P1-201ENST00000585406 838 ntBASIC15.95■□□□□ 0.14
POLR2J3Q9H1A7 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC15.95■□□□□ 0.14
POLR2J3Q9H1A7 AC124864.1-201ENST00000623408 392 ntBASIC15.95■□□□□ 0.14
POLR2J3Q9H1A7 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms