Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 LY6E-204ENST00000519546 971 ntTSL 2 BASIC21.47■■□□□ 1.03
CNTNAP4Q9C0A0 AC027369.6-201ENST00000525520 931 ntBASIC21.47■■□□□ 1.03
CNTNAP4Q9C0A0 RARRES2P9-201ENST00000565168 469 ntBASIC21.47■■□□□ 1.03
CNTNAP4Q9C0A0 AC018529.1-201ENST00000613063 361 ntBASIC21.47■■□□□ 1.03
CNTNAP4Q9C0A0 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CNTNAP4Q9C0A0 AC007967.4-201ENST00000614700 386 ntBASIC21.47■■□□□ 1.03
CNTNAP4Q9C0A0 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC21.47■■□□□ 1.03
CNTNAP4Q9C0A0 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC21.47■■□□□ 1.03
CNTNAP4Q9C0A0 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CNTNAP4Q9C0A0 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CNTNAP4Q9C0A0 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CNTNAP4Q9C0A0 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CNTNAP4Q9C0A0 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC21.46■■□□□ 1.03
CNTNAP4Q9C0A0 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CNTNAP4Q9C0A0 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CNTNAP4Q9C0A0 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CNTNAP4Q9C0A0 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CNTNAP4Q9C0A0 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CNTNAP4Q9C0A0 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CNTNAP4Q9C0A0 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC21.46■■□□□ 1.03
CNTNAP4Q9C0A0 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CNTNAP4Q9C0A0 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CNTNAP4Q9C0A0 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC21.46■■□□□ 1.03
CNTNAP4Q9C0A0 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CNTNAP4Q9C0A0 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC21.46■■□□□ 1.03
CNTNAP4Q9C0A0 SPTLC1P1-201ENST00000447199 261 ntBASIC21.46■■□□□ 1.03
CNTNAP4Q9C0A0 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CNTNAP4Q9C0A0 RN7SL692P-201ENST00000464677 288 ntBASIC21.46■■□□□ 1.03
CNTNAP4Q9C0A0 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CNTNAP4Q9C0A0 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CNTNAP4Q9C0A0 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC21.46■■□□□ 1.03
CNTNAP4Q9C0A0 AC073389.1-201ENST00000595595 795 ntBASIC21.46■■□□□ 1.03
CNTNAP4Q9C0A0 SRP9-204ENST00000619790 377 ntTSL 2 BASIC21.46■■□□□ 1.03
CNTNAP4Q9C0A0 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CNTNAP4Q9C0A0 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
CNTNAP4Q9C0A0 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CNTNAP4Q9C0A0 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.46■■□□□ 1.03
CNTNAP4Q9C0A0 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CNTNAP4Q9C0A0 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CNTNAP4Q9C0A0 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CNTNAP4Q9C0A0 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC21.45■■□□□ 1.02
CNTNAP4Q9C0A0 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CNTNAP4Q9C0A0 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
CNTNAP4Q9C0A0 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CNTNAP4Q9C0A0 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC21.45■■□□□ 1.02
CNTNAP4Q9C0A0 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC21.45■■□□□ 1.02
CNTNAP4Q9C0A0 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CNTNAP4Q9C0A0 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CNTNAP4Q9C0A0 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CNTNAP4Q9C0A0 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC21.45■■□□□ 1.02
CNTNAP4Q9C0A0 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC21.45■■□□□ 1.02
CNTNAP4Q9C0A0 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CNTNAP4Q9C0A0 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC21.45■■□□□ 1.02
CNTNAP4Q9C0A0 AC105233.2-201ENST00000523697 349 ntBASIC21.45■■□□□ 1.02
CNTNAP4Q9C0A0 AF228730.5-201ENST00000530288 346 ntBASIC21.45■■□□□ 1.02
CNTNAP4Q9C0A0 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
CNTNAP4Q9C0A0 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CNTNAP4Q9C0A0 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CNTNAP4Q9C0A0 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CNTNAP4Q9C0A0 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC21.45■■□□□ 1.02
CNTNAP4Q9C0A0 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
CNTNAP4Q9C0A0 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC21.45■■□□□ 1.02
CNTNAP4Q9C0A0 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
CNTNAP4Q9C0A0 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC21.44■■□□□ 1.02
CNTNAP4Q9C0A0 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.44■■□□□ 1.02
CNTNAP4Q9C0A0 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC21.44■■□□□ 1.02
CNTNAP4Q9C0A0 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC21.44■■□□□ 1.02
CNTNAP4Q9C0A0 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CNTNAP4Q9C0A0 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CNTNAP4Q9C0A0 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC21.44■■□□□ 1.02
CNTNAP4Q9C0A0 GRAMD4P3-201ENST00000621665 1669 ntBASIC21.44■■□□□ 1.02
CNTNAP4Q9C0A0 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CNTNAP4Q9C0A0 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
CNTNAP4Q9C0A0 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CNTNAP4Q9C0A0 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC21.44■■□□□ 1.02
CNTNAP4Q9C0A0 AL138828.2-201ENST00000615812 383 ntBASIC21.44■■□□□ 1.02
CNTNAP4Q9C0A0 AP001350.2-201ENST00000625104 1094 ntBASIC21.44■■□□□ 1.02
CNTNAP4Q9C0A0 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CNTNAP4Q9C0A0 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CNTNAP4Q9C0A0 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CNTNAP4Q9C0A0 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CNTNAP4Q9C0A0 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC21.44■■□□□ 1.02
CNTNAP4Q9C0A0 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CNTNAP4Q9C0A0 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CNTNAP4Q9C0A0 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CNTNAP4Q9C0A0 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CNTNAP4Q9C0A0 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CNTNAP4Q9C0A0 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CNTNAP4Q9C0A0 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
CNTNAP4Q9C0A0 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
CNTNAP4Q9C0A0 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CNTNAP4Q9C0A0 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC21.43■■□□□ 1.02
CNTNAP4Q9C0A0 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC21.43■■□□□ 1.02
CNTNAP4Q9C0A0 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CNTNAP4Q9C0A0 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CNTNAP4Q9C0A0 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
CNTNAP4Q9C0A0 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CNTNAP4Q9C0A0 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC21.43■■□□□ 1.02
CNTNAP4Q9C0A0 TMPRSS11CP-201ENST00000453277 683 ntBASIC21.43■■□□□ 1.02
CNTNAP4Q9C0A0 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms