Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.01□□□□□ -0.17
NKX6-2Q9C056 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NKX6-2Q9C056 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
NKX6-2Q9C056 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
NKX6-2Q9C056 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NKX6-2Q9C056 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NKX6-2Q9C056 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14□□□□□ -0.17
NKX6-2Q9C056 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC14□□□□□ -0.17
NKX6-2Q9C056 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NKX6-2Q9C056 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14□□□□□ -0.17
NKX6-2Q9C056 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
NKX6-2Q9C056 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
NKX6-2Q9C056 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
NKX6-2Q9C056 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14□□□□□ -0.17
NKX6-2Q9C056 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14□□□□□ -0.17
NKX6-2Q9C056 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC14□□□□□ -0.17
NKX6-2Q9C056 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14□□□□□ -0.17
NKX6-2Q9C056 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
NKX6-2Q9C056 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NKX6-2Q9C056 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC14□□□□□ -0.17
NKX6-2Q9C056 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
NKX6-2Q9C056 F2R-202ENST00000505600 442 ntTSL 2 BASIC14□□□□□ -0.17
NKX6-2Q9C056 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC14□□□□□ -0.17
NKX6-2Q9C056 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC14□□□□□ -0.17
NKX6-2Q9C056 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NKX6-2Q9C056 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC14□□□□□ -0.17
NKX6-2Q9C056 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC14□□□□□ -0.17
NKX6-2Q9C056 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NKX6-2Q9C056 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
NKX6-2Q9C056 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14□□□□□ -0.17
NKX6-2Q9C056 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
NKX6-2Q9C056 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NKX6-2Q9C056 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NKX6-2Q9C056 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC14□□□□□ -0.17
NKX6-2Q9C056 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14□□□□□ -0.17
NKX6-2Q9C056 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
NKX6-2Q9C056 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NKX6-2Q9C056 AC034236.2-201ENST00000606662 1610 ntBASIC14□□□□□ -0.17
NKX6-2Q9C056 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14□□□□□ -0.17
NKX6-2Q9C056 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14□□□□□ -0.17
NKX6-2Q9C056 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NKX6-2Q9C056 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC14□□□□□ -0.17
NKX6-2Q9C056 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NKX6-2Q9C056 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14□□□□□ -0.17
NKX6-2Q9C056 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC14□□□□□ -0.17
NKX6-2Q9C056 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
NKX6-2Q9C056 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC14□□□□□ -0.17
NKX6-2Q9C056 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NKX6-2Q9C056 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NKX6-2Q9C056 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.99□□□□□ -0.17
NKX6-2Q9C056 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.99□□□□□ -0.17
NKX6-2Q9C056 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13.99□□□□□ -0.17
NKX6-2Q9C056 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NKX6-2Q9C056 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NKX6-2Q9C056 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NKX6-2Q9C056 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NKX6-2Q9C056 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NKX6-2Q9C056 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NKX6-2Q9C056 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.99□□□□□ -0.17
NKX6-2Q9C056 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.99□□□□□ -0.17
NKX6-2Q9C056 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NKX6-2Q9C056 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NKX6-2Q9C056 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
NKX6-2Q9C056 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NKX6-2Q9C056 UNC93B4-201ENST00000505679 747 ntBASIC13.99□□□□□ -0.17
NKX6-2Q9C056 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC13.99□□□□□ -0.17
NKX6-2Q9C056 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC13.99□□□□□ -0.17
NKX6-2Q9C056 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NKX6-2Q9C056 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC13.99□□□□□ -0.17
NKX6-2Q9C056 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC13.99□□□□□ -0.17
NKX6-2Q9C056 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC13.99□□□□□ -0.17
NKX6-2Q9C056 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NKX6-2Q9C056 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NKX6-2Q9C056 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NKX6-2Q9C056 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NKX6-2Q9C056 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NKX6-2Q9C056 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.99□□□□□ -0.17
NKX6-2Q9C056 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NKX6-2Q9C056 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.99□□□□□ -0.17
NKX6-2Q9C056 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NKX6-2Q9C056 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NKX6-2Q9C056 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NKX6-2Q9C056 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NKX6-2Q9C056 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.99□□□□□ -0.17
NKX6-2Q9C056 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NKX6-2Q9C056 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.98□□□□□ -0.17
NKX6-2Q9C056 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
NKX6-2Q9C056 AC026748.1-201ENST00000624349 3251 ntBASIC13.98□□□□□ -0.17
NKX6-2Q9C056 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
NKX6-2Q9C056 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NKX6-2Q9C056 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NKX6-2Q9C056 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NKX6-2Q9C056 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NKX6-2Q9C056 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
NKX6-2Q9C056 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NKX6-2Q9C056 MIR564-202ENST00000385049 94 ntBASIC13.98□□□□□ -0.17
NKX6-2Q9C056 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC13.98□□□□□ -0.17
NKX6-2Q9C056 SLC29A4P1-201ENST00000398760 971 ntBASIC13.98□□□□□ -0.17
NKX6-2Q9C056 METTL15-202ENST00000403099 795 ntTSL 5 BASIC13.98□□□□□ -0.17
NKX6-2Q9C056 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms