Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
KRTAP4-1Q9BYQ7 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
KRTAP4-1Q9BYQ7 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC8.84□□□□□ -0.99
KRTAP4-1Q9BYQ7 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
KRTAP4-1Q9BYQ7 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC8.84□□□□□ -0.99
KRTAP4-1Q9BYQ7 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC8.84□□□□□ -0.99
KRTAP4-1Q9BYQ7 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC8.84□□□□□ -0.99
KRTAP4-1Q9BYQ7 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC8.84□□□□□ -0.99
KRTAP4-1Q9BYQ7 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
KRTAP4-1Q9BYQ7 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC8.84□□□□□ -0.99
KRTAP4-1Q9BYQ7 AL596325.1-201ENST00000563991 1082 ntBASIC8.84□□□□□ -0.99
KRTAP4-1Q9BYQ7 AC005412.3-201ENST00000580309 715 ntBASIC8.84□□□□□ -0.99
KRTAP4-1Q9BYQ7 U1.21-201ENST00000580816 167 ntBASIC8.84□□□□□ -0.99
KRTAP4-1Q9BYQ7 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC8.84□□□□□ -0.99
KRTAP4-1Q9BYQ7 COQ4-205ENST00000609948 956 ntTSL 2 BASIC8.84□□□□□ -0.99
KRTAP4-1Q9BYQ7 AL662799.1-202ENST00000614205 422 ntBASIC8.84□□□□□ -0.99
KRTAP4-1Q9BYQ7 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC8.84□□□□□ -0.99
KRTAP4-1Q9BYQ7 AL590560.3-201ENST00000623350 461 ntBASIC8.84□□□□□ -0.99
KRTAP4-1Q9BYQ7 LINC01451-201ENST00000623792 534 ntBASIC8.84□□□□□ -0.99
KRTAP4-1Q9BYQ7 AC008267.7-201ENST00000624570 1194 ntBASIC8.84□□□□□ -0.99
KRTAP4-1Q9BYQ7 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC8.84□□□□□ -0.99
KRTAP4-1Q9BYQ7 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC8.84□□□□□ -0.99
KRTAP4-1Q9BYQ7 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
KRTAP4-1Q9BYQ7 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
KRTAP4-1Q9BYQ7 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
KRTAP4-1Q9BYQ7 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC8.84□□□□□ -0.99
KRTAP4-1Q9BYQ7 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
KRTAP4-1Q9BYQ7 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC8.84□□□□□ -0.99
KRTAP4-1Q9BYQ7 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
KRTAP4-1Q9BYQ7 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
KRTAP4-1Q9BYQ7 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
KRTAP4-1Q9BYQ7 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC8.84□□□□□ -0.99
KRTAP4-1Q9BYQ7 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
KRTAP4-1Q9BYQ7 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC8.84□□□□□ -1
KRTAP4-1Q9BYQ7 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
KRTAP4-1Q9BYQ7 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC8.84□□□□□ -1
KRTAP4-1Q9BYQ7 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC8.84□□□□□ -1
KRTAP4-1Q9BYQ7 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 AC100757.3-201ENST00000622361 1406 ntBASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 COX5BP8-201ENST00000416911 349 ntBASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 SPDYE7P-202ENST00000420373 878 ntBASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 NME2P1-201ENST00000426182 414 ntBASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 AL512638.1-201ENST00000457493 794 ntBASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 COX11-202ENST00000571584 1108 ntTSL 2 BASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 AL031055.1-201ENST00000606362 631 ntBASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 SPDYE12P-201ENST00000618416 771 ntBASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 FOXO1B-201ENST00000504678 1527 ntBASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 BX323043.1-201ENST00000641006 1765 ntBASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC8.83□□□□□ -1
KRTAP4-1Q9BYQ7 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC8.82□□□□□ -1
KRTAP4-1Q9BYQ7 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC8.82□□□□□ -1
KRTAP4-1Q9BYQ7 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms