Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.83■□□□□ 0.28
EBF4Q9BQW3 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
EBF4Q9BQW3 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
EBF4Q9BQW3 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
EBF4Q9BQW3 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
EBF4Q9BQW3 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EBF4Q9BQW3 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
EBF4Q9BQW3 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.83■□□□□ 0.28
EBF4Q9BQW3 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.83■□□□□ 0.28
EBF4Q9BQW3 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.83■□□□□ 0.28
EBF4Q9BQW3 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
EBF4Q9BQW3 AC141257.4-201ENST00000634557 245 ntBASIC16.83■□□□□ 0.28
EBF4Q9BQW3 AC136944.6-201ENST00000634818 245 ntBASIC16.83■□□□□ 0.28
EBF4Q9BQW3 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EBF4Q9BQW3 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EBF4Q9BQW3 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.82■□□□□ 0.28
EBF4Q9BQW3 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
EBF4Q9BQW3 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.82■□□□□ 0.28
EBF4Q9BQW3 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EBF4Q9BQW3 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EBF4Q9BQW3 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EBF4Q9BQW3 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
EBF4Q9BQW3 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
EBF4Q9BQW3 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EBF4Q9BQW3 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
EBF4Q9BQW3 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
EBF4Q9BQW3 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EBF4Q9BQW3 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EBF4Q9BQW3 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
EBF4Q9BQW3 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
EBF4Q9BQW3 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
EBF4Q9BQW3 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
EBF4Q9BQW3 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
EBF4Q9BQW3 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
EBF4Q9BQW3 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
EBF4Q9BQW3 IGHGP-201ENST00000390555 1178 ntBASIC16.82■□□□□ 0.28
EBF4Q9BQW3 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.82■□□□□ 0.28
EBF4Q9BQW3 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.82■□□□□ 0.28
EBF4Q9BQW3 HLA-F-220ENST00000434407 884 ntBASIC16.82■□□□□ 0.28
EBF4Q9BQW3 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.82■□□□□ 0.28
EBF4Q9BQW3 SNORA78-201ENST00000459373 127 ntBASIC16.82■□□□□ 0.28
EBF4Q9BQW3 AC109462.3-201ENST00000573934 613 ntBASIC16.82■□□□□ 0.28
EBF4Q9BQW3 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
EBF4Q9BQW3 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.82■□□□□ 0.28
EBF4Q9BQW3 AL023973.1-201ENST00000624619 620 ntBASIC16.82■□□□□ 0.28
EBF4Q9BQW3 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
EBF4Q9BQW3 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.82■□□□□ 0.28
EBF4Q9BQW3 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
EBF4Q9BQW3 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
EBF4Q9BQW3 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EBF4Q9BQW3 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.82■□□□□ 0.28
EBF4Q9BQW3 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EBF4Q9BQW3 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
EBF4Q9BQW3 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
EBF4Q9BQW3 ALOX12P2-203ENST00000570921 1945 ntBASIC16.82■□□□□ 0.28
EBF4Q9BQW3 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EBF4Q9BQW3 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EBF4Q9BQW3 AC105917.1-201ENST00000506637 2539 ntBASIC16.81■□□□□ 0.28
EBF4Q9BQW3 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EBF4Q9BQW3 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EBF4Q9BQW3 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
EBF4Q9BQW3 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
EBF4Q9BQW3 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
EBF4Q9BQW3 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.81■□□□□ 0.28
EBF4Q9BQW3 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.81■□□□□ 0.28
EBF4Q9BQW3 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
EBF4Q9BQW3 AC024909.3-201ENST00000611513 2257 ntBASIC16.81■□□□□ 0.28
EBF4Q9BQW3 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
EBF4Q9BQW3 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EBF4Q9BQW3 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EBF4Q9BQW3 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EBF4Q9BQW3 AL353692.3-201ENST00000407031 1396 ntBASIC16.81■□□□□ 0.28
EBF4Q9BQW3 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
EBF4Q9BQW3 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
EBF4Q9BQW3 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EBF4Q9BQW3 MYCLP1-201ENST00000372451 1075 ntBASIC16.81■□□□□ 0.28
EBF4Q9BQW3 MIR718-201ENST00000390190 70 ntBASIC16.81■□□□□ 0.28
EBF4Q9BQW3 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
EBF4Q9BQW3 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.81■□□□□ 0.28
EBF4Q9BQW3 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.81■□□□□ 0.28
EBF4Q9BQW3 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.81■□□□□ 0.28
EBF4Q9BQW3 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.81■□□□□ 0.28
EBF4Q9BQW3 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.81■□□□□ 0.28
EBF4Q9BQW3 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.81■□□□□ 0.28
EBF4Q9BQW3 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.81■□□□□ 0.28
EBF4Q9BQW3 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.81■□□□□ 0.28
EBF4Q9BQW3 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EBF4Q9BQW3 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EBF4Q9BQW3 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.81■□□□□ 0.28
EBF4Q9BQW3 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
EBF4Q9BQW3 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EBF4Q9BQW3 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
EBF4Q9BQW3 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
EBF4Q9BQW3 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.8■□□□□ 0.28
EBF4Q9BQW3 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
EBF4Q9BQW3 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.8■□□□□ 0.28
EBF4Q9BQW3 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EBF4Q9BQW3 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.8■□□□□ 0.28
EBF4Q9BQW3 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
EBF4Q9BQW3 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms