Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
ABCA3Q99758 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC22.58■■□□□ 1.21
ABCA3Q99758 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
ABCA3Q99758 DFFBP1-201ENST00000433250 979 ntBASIC22.58■■□□□ 1.21
ABCA3Q99758 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC22.58■■□□□ 1.21
ABCA3Q99758 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC22.58■■□□□ 1.21
ABCA3Q99758 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
ABCA3Q99758 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC22.58■■□□□ 1.21
ABCA3Q99758 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
ABCA3Q99758 WT1-AS_2.1-201ENST00000613208 137 ntBASIC22.58■■□□□ 1.21
ABCA3Q99758 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
ABCA3Q99758 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC22.58■■□□□ 1.21
ABCA3Q99758 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.21
ABCA3Q99758 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC22.58■■□□□ 1.21
ABCA3Q99758 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.21
ABCA3Q99758 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC22.58■■□□□ 1.2
ABCA3Q99758 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.2
ABCA3Q99758 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC22.58■■□□□ 1.2
ABCA3Q99758 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
ABCA3Q99758 AL391825.1-201ENST00000457671 1364 ntBASIC22.58■■□□□ 1.2
ABCA3Q99758 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.2
ABCA3Q99758 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC22.57■■□□□ 1.2
ABCA3Q99758 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
ABCA3Q99758 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
ABCA3Q99758 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
ABCA3Q99758 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC22.57■■□□□ 1.2
ABCA3Q99758 AL353705.2-201ENST00000428243 662 ntBASIC22.57■■□□□ 1.2
ABCA3Q99758 STARD13-205ENST00000439831 945 ntTSL 2 BASIC22.57■■□□□ 1.2
ABCA3Q99758 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC22.57■■□□□ 1.2
ABCA3Q99758 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
ABCA3Q99758 APOC4-201ENST00000591600 348 ntTSL 3 BASIC22.57■■□□□ 1.2
ABCA3Q99758 CYP2A7P1-201ENST00000595391 815 ntBASIC22.57■■□□□ 1.2
ABCA3Q99758 AC008494.3-201ENST00000606615 944 ntBASIC22.57■■□□□ 1.2
ABCA3Q99758 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
ABCA3Q99758 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC22.57■■□□□ 1.2
ABCA3Q99758 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
ABCA3Q99758 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
ABCA3Q99758 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
ABCA3Q99758 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
ABCA3Q99758 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
ABCA3Q99758 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
ABCA3Q99758 RASL12-203ENST00000434605 982 ntTSL 2 BASIC22.57■■□□□ 1.2
ABCA3Q99758 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC22.57■■□□□ 1.2
ABCA3Q99758 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC22.57■■□□□ 1.2
ABCA3Q99758 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
ABCA3Q99758 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC22.57■■□□□ 1.2
ABCA3Q99758 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC22.57■■□□□ 1.2
ABCA3Q99758 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC22.57■■□□□ 1.2
ABCA3Q99758 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
ABCA3Q99758 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
ABCA3Q99758 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
ABCA3Q99758 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC22.56■■□□□ 1.2
ABCA3Q99758 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC22.56■■□□□ 1.2
ABCA3Q99758 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC22.56■■□□□ 1.2
ABCA3Q99758 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
ABCA3Q99758 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
ABCA3Q99758 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
ABCA3Q99758 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC22.56■■□□□ 1.2
ABCA3Q99758 Six3os1_5.1-201ENST00000611000 271 ntBASIC22.56■■□□□ 1.2
ABCA3Q99758 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
ABCA3Q99758 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
ABCA3Q99758 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
ABCA3Q99758 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC22.56■■□□□ 1.2
ABCA3Q99758 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
ABCA3Q99758 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC22.56■■□□□ 1.2
ABCA3Q99758 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ABCA3Q99758 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ABCA3Q99758 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC22.55■■□□□ 1.2
ABCA3Q99758 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
ABCA3Q99758 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC22.55■■□□□ 1.2
ABCA3Q99758 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ABCA3Q99758 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
ABCA3Q99758 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
ABCA3Q99758 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ABCA3Q99758 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
ABCA3Q99758 MIR658-201ENST00000385210 100 ntBASIC22.55■■□□□ 1.2
ABCA3Q99758 MXI1-205ENST00000393134 889 ntTSL 2 BASIC22.55■■□□□ 1.2
ABCA3Q99758 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC22.55■■□□□ 1.2
ABCA3Q99758 MTND6P24-201ENST00000440466 518 ntBASIC22.55■■□□□ 1.2
ABCA3Q99758 TTTY23B-201ENST00000442790 549 ntBASIC22.55■■□□□ 1.2
ABCA3Q99758 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC22.55■■□□□ 1.2
ABCA3Q99758 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC22.55■■□□□ 1.2
ABCA3Q99758 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ABCA3Q99758 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ABCA3Q99758 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
ABCA3Q99758 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
ABCA3Q99758 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
ABCA3Q99758 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ABCA3Q99758 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
ABCA3Q99758 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
ABCA3Q99758 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ABCA3Q99758 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
ABCA3Q99758 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
ABCA3Q99758 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC22.54■■□□□ 1.2
ABCA3Q99758 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
ABCA3Q99758 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
ABCA3Q99758 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC22.54■■□□□ 1.2
ABCA3Q99758 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
ABCA3Q99758 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC22.54■■□□□ 1.2
ABCA3Q99758 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms