Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.88□□□□□ -0.03
COL12A1Q99715 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.88□□□□□ -0.03
COL12A1Q99715 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC14.88□□□□□ -0.03
COL12A1Q99715 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL12A1Q99715 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC14.88□□□□□ -0.03
COL12A1Q99715 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC14.88□□□□□ -0.03
COL12A1Q99715 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC14.88□□□□□ -0.03
COL12A1Q99715 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL12A1Q99715 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL12A1Q99715 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
COL12A1Q99715 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.88□□□□□ -0.03
COL12A1Q99715 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.88□□□□□ -0.03
COL12A1Q99715 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.88□□□□□ -0.03
COL12A1Q99715 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.88□□□□□ -0.03
COL12A1Q99715 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.88□□□□□ -0.03
COL12A1Q99715 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
COL12A1Q99715 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.88□□□□□ -0.03
COL12A1Q99715 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.88□□□□□ -0.03
COL12A1Q99715 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.88□□□□□ -0.03
COL12A1Q99715 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL12A1Q99715 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL12A1Q99715 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
COL12A1Q99715 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.87□□□□□ -0.03
COL12A1Q99715 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
COL12A1Q99715 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC14.87□□□□□ -0.03
COL12A1Q99715 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
COL12A1Q99715 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL12A1Q99715 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL12A1Q99715 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
COL12A1Q99715 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.87□□□□□ -0.03
COL12A1Q99715 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC14.87□□□□□ -0.03
COL12A1Q99715 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.87□□□□□ -0.03
COL12A1Q99715 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.87□□□□□ -0.03
COL12A1Q99715 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
COL12A1Q99715 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
COL12A1Q99715 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
COL12A1Q99715 AC093010.1-201ENST00000473625 1624 ntBASIC14.87□□□□□ -0.03
COL12A1Q99715 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL12A1Q99715 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC14.87□□□□□ -0.03
COL12A1Q99715 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
COL12A1Q99715 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
COL12A1Q99715 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
COL12A1Q99715 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC14.87□□□□□ -0.03
COL12A1Q99715 SPDYE19P-201ENST00000338590 713 ntBASIC14.87□□□□□ -0.03
COL12A1Q99715 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
COL12A1Q99715 BRWD1P1-201ENST00000401091 371 ntBASIC14.87□□□□□ -0.03
COL12A1Q99715 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
COL12A1Q99715 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL12A1Q99715 AP000997.3-201ENST00000623333 2250 ntBASIC14.87□□□□□ -0.03
COL12A1Q99715 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL12A1Q99715 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL12A1Q99715 AP3S2-216ENST00000617003 1561 ntBASIC14.87□□□□□ -0.03
COL12A1Q99715 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.87□□□□□ -0.03
COL12A1Q99715 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL12A1Q99715 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
COL12A1Q99715 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC14.86□□□□□ -0.03
COL12A1Q99715 MIR663B-201ENST00000408361 115 ntBASIC14.86□□□□□ -0.03
COL12A1Q99715 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.86□□□□□ -0.03
COL12A1Q99715 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL12A1Q99715 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
COL12A1Q99715 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.86□□□□□ -0.03
COL12A1Q99715 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
COL12A1Q99715 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
COL12A1Q99715 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
COL12A1Q99715 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
COL12A1Q99715 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.86□□□□□ -0.03
COL12A1Q99715 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.86□□□□□ -0.03
COL12A1Q99715 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL12A1Q99715 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC14.86□□□□□ -0.03
COL12A1Q99715 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL12A1Q99715 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.86□□□□□ -0.03
COL12A1Q99715 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
COL12A1Q99715 CROCCP4-201ENST00000457096 498 ntBASIC14.86□□□□□ -0.03
COL12A1Q99715 SPDYE18-201ENST00000510091 1050 ntBASIC14.86□□□□□ -0.03
COL12A1Q99715 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.86□□□□□ -0.03
COL12A1Q99715 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.86□□□□□ -0.03
COL12A1Q99715 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
COL12A1Q99715 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.86□□□□□ -0.03
COL12A1Q99715 AL161645.1-201ENST00000622716 1255 ntBASIC14.86□□□□□ -0.03
COL12A1Q99715 AC073592.8-201ENST00000624126 511 ntBASIC14.86□□□□□ -0.03
COL12A1Q99715 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.86□□□□□ -0.03
COL12A1Q99715 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
COL12A1Q99715 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL12A1Q99715 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL12A1Q99715 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL12A1Q99715 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC14.86□□□□□ -0.03
COL12A1Q99715 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
COL12A1Q99715 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL12A1Q99715 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL12A1Q99715 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC14.86□□□□□ -0.03
COL12A1Q99715 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL12A1Q99715 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
COL12A1Q99715 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.86□□□□□ -0.03
COL12A1Q99715 CSF2RBP1-201ENST00000447905 391 ntBASIC14.86□□□□□ -0.03
COL12A1Q99715 AC007389.4-201ENST00000454674 793 ntBASIC14.86□□□□□ -0.03
COL12A1Q99715 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC14.86□□□□□ -0.03
COL12A1Q99715 ELK1P1-201ENST00000485699 580 ntBASIC14.86□□□□□ -0.03
COL12A1Q99715 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.86□□□□□ -0.03
COL12A1Q99715 AC103810.3-201ENST00000583567 96 ntBASIC14.86□□□□□ -0.03
COL12A1Q99715 SLC7A15P-201ENST00000424028 1363 ntBASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms