Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDCA3Q99618 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDCA3Q99618 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDCA3Q99618 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
CDCA3Q99618 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDCA3Q99618 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDCA3Q99618 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
CDCA3Q99618 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.76■□□□□ 0.43
CDCA3Q99618 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDCA3Q99618 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.76■□□□□ 0.43
CDCA3Q99618 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.76■□□□□ 0.43
CDCA3Q99618 AC004233.3-201ENST00000607794 1269 ntBASIC17.76■□□□□ 0.43
CDCA3Q99618 AC018529.1-201ENST00000613063 361 ntBASIC17.76■□□□□ 0.43
CDCA3Q99618 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.76■□□□□ 0.43
CDCA3Q99618 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CDCA3Q99618 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDCA3Q99618 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CDCA3Q99618 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDCA3Q99618 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDCA3Q99618 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.76■□□□□ 0.43
CDCA3Q99618 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDCA3Q99618 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDCA3Q99618 AC022144.1-201ENST00000602255 1580 ntBASIC17.75■□□□□ 0.43
CDCA3Q99618 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDCA3Q99618 AC138028.4-201ENST00000564984 1845 ntBASIC17.75■□□□□ 0.43
CDCA3Q99618 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDCA3Q99618 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDCA3Q99618 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.75■□□□□ 0.43
CDCA3Q99618 COX5BP8-201ENST00000416911 349 ntBASIC17.75■□□□□ 0.43
CDCA3Q99618 TSSK5P-201ENST00000423978 907 ntBASIC17.75■□□□□ 0.43
CDCA3Q99618 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.75■□□□□ 0.43
CDCA3Q99618 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.75■□□□□ 0.43
CDCA3Q99618 RN7SL692P-201ENST00000464677 288 ntBASIC17.75■□□□□ 0.43
CDCA3Q99618 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CDCA3Q99618 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.75■□□□□ 0.43
CDCA3Q99618 MIR6752-201ENST00000618442 71 ntBASIC17.75■□□□□ 0.43
CDCA3Q99618 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.75■□□□□ 0.43
CDCA3Q99618 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDCA3Q99618 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDCA3Q99618 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
CDCA3Q99618 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
CDCA3Q99618 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.75■□□□□ 0.43
CDCA3Q99618 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDCA3Q99618 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDCA3Q99618 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDCA3Q99618 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDCA3Q99618 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDCA3Q99618 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDCA3Q99618 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDCA3Q99618 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDCA3Q99618 LYSMD4-203ENST00000378904 2122 ntBASIC17.74■□□□□ 0.43
CDCA3Q99618 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CDCA3Q99618 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDCA3Q99618 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CDCA3Q99618 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CDCA3Q99618 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDCA3Q99618 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.74■□□□□ 0.43
CDCA3Q99618 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDCA3Q99618 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDCA3Q99618 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDCA3Q99618 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.74■□□□□ 0.43
CDCA3Q99618 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.74■□□□□ 0.43
CDCA3Q99618 AC105233.2-201ENST00000523697 349 ntBASIC17.74■□□□□ 0.43
CDCA3Q99618 AF228730.5-201ENST00000530288 346 ntBASIC17.74■□□□□ 0.43
CDCA3Q99618 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.74■□□□□ 0.43
CDCA3Q99618 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
CDCA3Q99618 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.74■□□□□ 0.43
CDCA3Q99618 AC007967.4-201ENST00000614700 386 ntBASIC17.74■□□□□ 0.43
CDCA3Q99618 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CDCA3Q99618 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CDCA3Q99618 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CDCA3Q99618 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDCA3Q99618 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDCA3Q99618 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.74■□□□□ 0.43
CDCA3Q99618 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.74■□□□□ 0.43
CDCA3Q99618 AC016027.1-202ENST00000607927 1699 ntBASIC17.74■□□□□ 0.43
CDCA3Q99618 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.74■□□□□ 0.43
CDCA3Q99618 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDCA3Q99618 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDCA3Q99618 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CDCA3Q99618 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDCA3Q99618 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDCA3Q99618 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDCA3Q99618 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDCA3Q99618 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDCA3Q99618 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.73■□□□□ 0.43
CDCA3Q99618 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CDCA3Q99618 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDCA3Q99618 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDCA3Q99618 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CDCA3Q99618 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDCA3Q99618 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDCA3Q99618 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.73■□□□□ 0.43
CDCA3Q99618 HLA-V-204ENST00000476601 1289 ntBASIC17.73■□□□□ 0.43
CDCA3Q99618 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CDCA3Q99618 MEIS3P1-201ENST00000495167 958 ntBASIC17.73■□□□□ 0.43
CDCA3Q99618 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.73■□□□□ 0.43
CDCA3Q99618 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.73■□□□□ 0.43
CDCA3Q99618 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CDCA3Q99618 RARRES2P9-201ENST00000565168 469 ntBASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms