Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NEK1Q96PY6 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NEK1Q96PY6 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NEK1Q96PY6 AC092068.3-201ENST00000587894 2016 ntBASIC20.41■□□□□ 0.86
NEK1Q96PY6 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC20.41■□□□□ 0.86
NEK1Q96PY6 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NEK1Q96PY6 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC20.4■□□□□ 0.86
NEK1Q96PY6 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NEK1Q96PY6 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NEK1Q96PY6 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
NEK1Q96PY6 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NEK1Q96PY6 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC20.4■□□□□ 0.86
NEK1Q96PY6 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
NEK1Q96PY6 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.4■□□□□ 0.86
NEK1Q96PY6 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.4■□□□□ 0.86
NEK1Q96PY6 FRMD8P1-201ENST00000440433 1524 ntBASIC20.4■□□□□ 0.86
NEK1Q96PY6 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC20.4■□□□□ 0.86
NEK1Q96PY6 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.4■□□□□ 0.86
NEK1Q96PY6 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
NEK1Q96PY6 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC20.4■□□□□ 0.86
NEK1Q96PY6 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NEK1Q96PY6 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.4■□□□□ 0.86
NEK1Q96PY6 LINC01711-201ENST00000598340 967 ntBASIC20.4■□□□□ 0.86
NEK1Q96PY6 AC064862.7-201ENST00000604520 867 ntBASIC20.4■□□□□ 0.86
NEK1Q96PY6 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NEK1Q96PY6 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NEK1Q96PY6 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
NEK1Q96PY6 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC20.4■□□□□ 0.86
NEK1Q96PY6 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC20.4■□□□□ 0.86
NEK1Q96PY6 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NEK1Q96PY6 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
NEK1Q96PY6 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
NEK1Q96PY6 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
NEK1Q96PY6 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC20.39■□□□□ 0.86
NEK1Q96PY6 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
NEK1Q96PY6 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
NEK1Q96PY6 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC20.39■□□□□ 0.86
NEK1Q96PY6 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NEK1Q96PY6 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.39■□□□□ 0.85
NEK1Q96PY6 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NEK1Q96PY6 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.39■□□□□ 0.85
NEK1Q96PY6 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NEK1Q96PY6 AF238378.1-201ENST00000526806 358 ntBASIC20.39■□□□□ 0.85
NEK1Q96PY6 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NEK1Q96PY6 SART3-203ENST00000546611 1184 ntBASIC20.39■□□□□ 0.85
NEK1Q96PY6 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.39■□□□□ 0.85
NEK1Q96PY6 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.39■□□□□ 0.85
NEK1Q96PY6 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.39■□□□□ 0.85
NEK1Q96PY6 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.39■□□□□ 0.85
NEK1Q96PY6 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NEK1Q96PY6 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.39■□□□□ 0.85
NEK1Q96PY6 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
NEK1Q96PY6 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.39■□□□□ 0.85
NEK1Q96PY6 IFNL4P1-201ENST00000607083 540 ntBASIC20.39■□□□□ 0.85
NEK1Q96PY6 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NEK1Q96PY6 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NEK1Q96PY6 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NEK1Q96PY6 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC20.39■□□□□ 0.85
NEK1Q96PY6 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NEK1Q96PY6 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
NEK1Q96PY6 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
NEK1Q96PY6 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.39■□□□□ 0.85
NEK1Q96PY6 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NEK1Q96PY6 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
NEK1Q96PY6 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
NEK1Q96PY6 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NEK1Q96PY6 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NEK1Q96PY6 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NEK1Q96PY6 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
NEK1Q96PY6 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC20.38■□□□□ 0.85
NEK1Q96PY6 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NEK1Q96PY6 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC20.38■□□□□ 0.85
NEK1Q96PY6 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NEK1Q96PY6 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.38■□□□□ 0.85
NEK1Q96PY6 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
NEK1Q96PY6 NKILA-202ENST00000614771 2598 ntBASIC20.38■□□□□ 0.85
NEK1Q96PY6 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NEK1Q96PY6 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NEK1Q96PY6 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NEK1Q96PY6 SAPCD2P3-201ENST00000455031 850 ntBASIC20.38■□□□□ 0.85
NEK1Q96PY6 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
NEK1Q96PY6 UNC93B7-201ENST00000509439 705 ntBASIC20.38■□□□□ 0.85
NEK1Q96PY6 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.38■□□□□ 0.85
NEK1Q96PY6 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.38■□□□□ 0.85
NEK1Q96PY6 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
NEK1Q96PY6 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NEK1Q96PY6 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NEK1Q96PY6 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NEK1Q96PY6 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NEK1Q96PY6 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
NEK1Q96PY6 AC005915.1-201ENST00000624912 2018 ntBASIC20.37■□□□□ 0.85
NEK1Q96PY6 AC106886.4-201ENST00000623557 2502 ntBASIC20.37■□□□□ 0.85
NEK1Q96PY6 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
NEK1Q96PY6 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NEK1Q96PY6 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
NEK1Q96PY6 AC105020.1-201ENST00000435356 2205 ntBASIC20.37■□□□□ 0.85
NEK1Q96PY6 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NEK1Q96PY6 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC20.37■□□□□ 0.85
NEK1Q96PY6 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NEK1Q96PY6 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms