Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC106028.4-201ENST00000614509 607 ntBASIC19.54■□□□□ 0.72
SYNGAP1Q96PV0 AC093028.1-201ENST00000622998 982 ntBASIC19.54■□□□□ 0.72
SYNGAP1Q96PV0 AC105339.1-204ENST00000636249 355 ntBASIC19.54■□□□□ 0.72
SYNGAP1Q96PV0 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
SYNGAP1Q96PV0 AC046185.3-201ENST00000623228 1824 ntBASIC19.54■□□□□ 0.72
SYNGAP1Q96PV0 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SYNGAP1Q96PV0 AL135999.2-201ENST00000622438 1686 ntBASIC19.54■□□□□ 0.72
SYNGAP1Q96PV0 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SYNGAP1Q96PV0 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.54■□□□□ 0.72
SYNGAP1Q96PV0 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SYNGAP1Q96PV0 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.54■□□□□ 0.72
SYNGAP1Q96PV0 AL121761.2-201ENST00000598007 1648 ntBASIC19.54■□□□□ 0.72
SYNGAP1Q96PV0 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SYNGAP1Q96PV0 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.54■□□□□ 0.72
SYNGAP1Q96PV0 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.54■□□□□ 0.72
SYNGAP1Q96PV0 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.54■□□□□ 0.72
SYNGAP1Q96PV0 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SYNGAP1Q96PV0 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SYNGAP1Q96PV0 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SYNGAP1Q96PV0 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
SYNGAP1Q96PV0 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.53■□□□□ 0.72
SYNGAP1Q96PV0 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC19.53■□□□□ 0.72
SYNGAP1Q96PV0 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC19.53■□□□□ 0.72
SYNGAP1Q96PV0 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.53■□□□□ 0.72
SYNGAP1Q96PV0 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SYNGAP1Q96PV0 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SYNGAP1Q96PV0 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
SYNGAP1Q96PV0 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SYNGAP1Q96PV0 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SYNGAP1Q96PV0 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.53■□□□□ 0.72
SYNGAP1Q96PV0 AC008764.6-201ENST00000595909 2069 ntBASIC19.53■□□□□ 0.72
SYNGAP1Q96PV0 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SYNGAP1Q96PV0 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
SYNGAP1Q96PV0 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.53■□□□□ 0.72
SYNGAP1Q96PV0 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SYNGAP1Q96PV0 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SYNGAP1Q96PV0 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SYNGAP1Q96PV0 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC19.53■□□□□ 0.72
SYNGAP1Q96PV0 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SYNGAP1Q96PV0 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.53■□□□□ 0.72
SYNGAP1Q96PV0 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SYNGAP1Q96PV0 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.53■□□□□ 0.72
SYNGAP1Q96PV0 MIR770-201ENST00000390219 98 ntBASIC19.52■□□□□ 0.72
SYNGAP1Q96PV0 AC004461.1-201ENST00000412461 403 ntBASIC19.52■□□□□ 0.72
SYNGAP1Q96PV0 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SYNGAP1Q96PV0 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SYNGAP1Q96PV0 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SYNGAP1Q96PV0 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.52■□□□□ 0.72
SYNGAP1Q96PV0 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
SYNGAP1Q96PV0 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SYNGAP1Q96PV0 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
SYNGAP1Q96PV0 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SYNGAP1Q96PV0 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.52■□□□□ 0.72
SYNGAP1Q96PV0 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SYNGAP1Q96PV0 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
SYNGAP1Q96PV0 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SYNGAP1Q96PV0 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC19.52■□□□□ 0.72
SYNGAP1Q96PV0 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SYNGAP1Q96PV0 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SYNGAP1Q96PV0 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SYNGAP1Q96PV0 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SYNGAP1Q96PV0 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SYNGAP1Q96PV0 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.52■□□□□ 0.72
SYNGAP1Q96PV0 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SYNGAP1Q96PV0 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SYNGAP1Q96PV0 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SYNGAP1Q96PV0 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.52■□□□□ 0.72
SYNGAP1Q96PV0 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
SYNGAP1Q96PV0 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SYNGAP1Q96PV0 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.52■□□□□ 0.71
SYNGAP1Q96PV0 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
SYNGAP1Q96PV0 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
SYNGAP1Q96PV0 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
SYNGAP1Q96PV0 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SYNGAP1Q96PV0 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SYNGAP1Q96PV0 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
SYNGAP1Q96PV0 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.51■□□□□ 0.71
SYNGAP1Q96PV0 AL035633.1-201ENST00000406139 838 ntBASIC19.51■□□□□ 0.71
SYNGAP1Q96PV0 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SYNGAP1Q96PV0 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.51■□□□□ 0.71
SYNGAP1Q96PV0 AL513480.1-201ENST00000451731 511 ntBASIC19.51■□□□□ 0.71
SYNGAP1Q96PV0 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.51■□□□□ 0.71
SYNGAP1Q96PV0 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.51■□□□□ 0.71
SYNGAP1Q96PV0 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.51■□□□□ 0.71
SYNGAP1Q96PV0 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.51■□□□□ 0.71
SYNGAP1Q96PV0 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SYNGAP1Q96PV0 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.51■□□□□ 0.71
SYNGAP1Q96PV0 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.51■□□□□ 0.71
SYNGAP1Q96PV0 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SYNGAP1Q96PV0 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SYNGAP1Q96PV0 BCL2-203ENST00000589955 5011 ntBASIC19.51■□□□□ 0.71
SYNGAP1Q96PV0 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
SYNGAP1Q96PV0 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SYNGAP1Q96PV0 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SYNGAP1Q96PV0 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SYNGAP1Q96PV0 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SYNGAP1Q96PV0 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SYNGAP1Q96PV0 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
SYNGAP1Q96PV0 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
SYNGAP1Q96PV0 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms