Protein–RNA interactions for Protein: Q96P71

NECAB3, N-terminal EF-hand calcium-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3Q96P71 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17.55■□□□□ 0.4
NECAB3Q96P71 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
NECAB3Q96P71 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC17.55■□□□□ 0.4
NECAB3Q96P71 MFF-223ENST00000524634 647 ntTSL 2 BASIC17.55■□□□□ 0.4
NECAB3Q96P71 AC135586.1-201ENST00000539323 574 ntBASIC17.55■□□□□ 0.4
NECAB3Q96P71 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.55■□□□□ 0.4
NECAB3Q96P71 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NECAB3Q96P71 ARL16-210ENST00000574938 751 ntTSL 2 BASIC17.55■□□□□ 0.4
NECAB3Q96P71 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC17.55■□□□□ 0.4
NECAB3Q96P71 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC17.55■□□□□ 0.4
NECAB3Q96P71 AC004790.1-201ENST00000612686 536 ntBASIC17.55■□□□□ 0.4
NECAB3Q96P71 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
NECAB3Q96P71 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NECAB3Q96P71 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.55■□□□□ 0.4
NECAB3Q96P71 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.55■□□□□ 0.4
NECAB3Q96P71 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.55■□□□□ 0.4
NECAB3Q96P71 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
NECAB3Q96P71 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.55■□□□□ 0.4
NECAB3Q96P71 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NECAB3Q96P71 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NECAB3Q96P71 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NECAB3Q96P71 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NECAB3Q96P71 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
NECAB3Q96P71 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NECAB3Q96P71 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
NECAB3Q96P71 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.54■□□□□ 0.4
NECAB3Q96P71 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
NECAB3Q96P71 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NECAB3Q96P71 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC17.54■□□□□ 0.4
NECAB3Q96P71 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NECAB3Q96P71 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NECAB3Q96P71 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NECAB3Q96P71 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
NECAB3Q96P71 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NECAB3Q96P71 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NECAB3Q96P71 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.54■□□□□ 0.4
NECAB3Q96P71 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
NECAB3Q96P71 AC087499.6-201ENST00000411576 835 ntBASIC17.54■□□□□ 0.4
NECAB3Q96P71 HIST1H2BPS3-201ENST00000419683 341 ntBASIC17.54■□□□□ 0.4
NECAB3Q96P71 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.54■□□□□ 0.4
NECAB3Q96P71 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.54■□□□□ 0.4
NECAB3Q96P71 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.54■□□□□ 0.4
NECAB3Q96P71 CROCCP4-201ENST00000457096 498 ntBASIC17.54■□□□□ 0.4
NECAB3Q96P71 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NECAB3Q96P71 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.54■□□□□ 0.4
NECAB3Q96P71 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
NECAB3Q96P71 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
NECAB3Q96P71 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
NECAB3Q96P71 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
NECAB3Q96P71 ORC6-206ENST00000568364 888 ntTSL 5 BASIC17.54■□□□□ 0.4
NECAB3Q96P71 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.54■□□□□ 0.4
NECAB3Q96P71 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC17.54■□□□□ 0.4
NECAB3Q96P71 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NECAB3Q96P71 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NECAB3Q96P71 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NECAB3Q96P71 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NECAB3Q96P71 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.54■□□□□ 0.4
NECAB3Q96P71 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
NECAB3Q96P71 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
NECAB3Q96P71 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NECAB3Q96P71 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NECAB3Q96P71 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NECAB3Q96P71 AC020907.1-201ENST00000616460 1350 ntBASIC17.53■□□□□ 0.4
NECAB3Q96P71 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NECAB3Q96P71 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
NECAB3Q96P71 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
NECAB3Q96P71 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NECAB3Q96P71 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NECAB3Q96P71 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NECAB3Q96P71 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.53■□□□□ 0.4
NECAB3Q96P71 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NECAB3Q96P71 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NECAB3Q96P71 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NECAB3Q96P71 SPDYE19P-201ENST00000338590 713 ntBASIC17.53■□□□□ 0.4
NECAB3Q96P71 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC17.53■□□□□ 0.4
NECAB3Q96P71 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
NECAB3Q96P71 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.53■□□□□ 0.4
NECAB3Q96P71 AC099548.2-209ENST00000480264 625 ntBASIC17.53■□□□□ 0.4
NECAB3Q96P71 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.53■□□□□ 0.4
NECAB3Q96P71 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC17.53■□□□□ 0.4
NECAB3Q96P71 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC17.53■□□□□ 0.4
NECAB3Q96P71 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
NECAB3Q96P71 TEX28P1-201ENST00000613479 1221 ntBASIC17.53■□□□□ 0.4
NECAB3Q96P71 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NECAB3Q96P71 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
NECAB3Q96P71 TEX28P2-201ENST00000617764 1221 ntBASIC17.53■□□□□ 0.4
NECAB3Q96P71 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
NECAB3Q96P71 AC093010.1-201ENST00000473625 1624 ntBASIC17.53■□□□□ 0.4
NECAB3Q96P71 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
NECAB3Q96P71 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.53■□□□□ 0.4
NECAB3Q96P71 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.52■□□□□ 0.4
NECAB3Q96P71 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NECAB3Q96P71 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NECAB3Q96P71 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NECAB3Q96P71 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.52■□□□□ 0.4
NECAB3Q96P71 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NECAB3Q96P71 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.52■□□□□ 0.4
NECAB3Q96P71 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
NECAB3Q96P71 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NECAB3Q96P71 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms