Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.27■□□□□ 0.52
CALR3Q96L12 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CALR3Q96L12 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CALR3Q96L12 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
CALR3Q96L12 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CALR3Q96L12 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CALR3Q96L12 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.27■□□□□ 0.51
CALR3Q96L12 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.26■□□□□ 0.51
CALR3Q96L12 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CALR3Q96L12 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CALR3Q96L12 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CALR3Q96L12 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.26■□□□□ 0.51
CALR3Q96L12 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CALR3Q96L12 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CALR3Q96L12 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CALR3Q96L12 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CALR3Q96L12 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.26■□□□□ 0.51
CALR3Q96L12 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.26■□□□□ 0.51
CALR3Q96L12 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.26■□□□□ 0.51
CALR3Q96L12 VENTXP7-201ENST00000475503 772 ntBASIC18.26■□□□□ 0.51
CALR3Q96L12 AC005336.2-201ENST00000593183 939 ntBASIC18.26■□□□□ 0.51
CALR3Q96L12 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CALR3Q96L12 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CALR3Q96L12 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CALR3Q96L12 AC066615.1-201ENST00000640911 628 ntBASIC18.26■□□□□ 0.51
CALR3Q96L12 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CALR3Q96L12 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.26■□□□□ 0.51
CALR3Q96L12 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CALR3Q96L12 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CALR3Q96L12 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
CALR3Q96L12 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CALR3Q96L12 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.25■□□□□ 0.51
CALR3Q96L12 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CALR3Q96L12 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CALR3Q96L12 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
CALR3Q96L12 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CALR3Q96L12 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CALR3Q96L12 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CALR3Q96L12 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.25■□□□□ 0.51
CALR3Q96L12 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CALR3Q96L12 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.25■□□□□ 0.51
CALR3Q96L12 AL671277.2-201ENST00000458060 996 ntBASIC18.25■□□□□ 0.51
CALR3Q96L12 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.25■□□□□ 0.51
CALR3Q96L12 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.25■□□□□ 0.51
CALR3Q96L12 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.25■□□□□ 0.51
CALR3Q96L12 KRT8P26-201ENST00000534154 1276 ntBASIC18.25■□□□□ 0.51
CALR3Q96L12 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
CALR3Q96L12 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CALR3Q96L12 IGHV3-41-201ENST00000613121 348 ntBASIC18.25■□□□□ 0.51
CALR3Q96L12 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CALR3Q96L12 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CALR3Q96L12 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CALR3Q96L12 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CALR3Q96L12 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.25■□□□□ 0.51
CALR3Q96L12 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CALR3Q96L12 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CALR3Q96L12 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC18.25■□□□□ 0.51
CALR3Q96L12 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CALR3Q96L12 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.25■□□□□ 0.51
CALR3Q96L12 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CALR3Q96L12 AL135999.2-201ENST00000622438 1686 ntBASIC18.25■□□□□ 0.51
CALR3Q96L12 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CALR3Q96L12 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CALR3Q96L12 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CALR3Q96L12 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.24■□□□□ 0.51
CALR3Q96L12 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CALR3Q96L12 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.24■□□□□ 0.51
CALR3Q96L12 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CALR3Q96L12 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
CALR3Q96L12 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.24■□□□□ 0.51
CALR3Q96L12 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CALR3Q96L12 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CALR3Q96L12 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CALR3Q96L12 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CALR3Q96L12 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.24■□□□□ 0.51
CALR3Q96L12 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CALR3Q96L12 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.24■□□□□ 0.51
CALR3Q96L12 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.24■□□□□ 0.51
CALR3Q96L12 AD001527.2-201ENST00000622994 785 ntBASIC18.24■□□□□ 0.51
CALR3Q96L12 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.24■□□□□ 0.51
CALR3Q96L12 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CALR3Q96L12 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CALR3Q96L12 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CALR3Q96L12 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CALR3Q96L12 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.24■□□□□ 0.51
CALR3Q96L12 AC078925.2-201ENST00000624013 1973 ntBASIC18.24■□□□□ 0.51
CALR3Q96L12 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
CALR3Q96L12 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CALR3Q96L12 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CALR3Q96L12 TUBB8P12-201ENST00000308911 1335 ntBASIC18.23■□□□□ 0.51
CALR3Q96L12 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CALR3Q96L12 TUBB7P-202ENST00000428444 1305 ntBASIC18.23■□□□□ 0.51
CALR3Q96L12 TUBB8P7-204ENST00000567960 1332 ntBASIC18.23■□□□□ 0.51
CALR3Q96L12 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CALR3Q96L12 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CALR3Q96L12 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CALR3Q96L12 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.23■□□□□ 0.51
CALR3Q96L12 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CALR3Q96L12 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.23■□□□□ 0.51
CALR3Q96L12 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms