Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SIPA1Q96FS4 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SIPA1Q96FS4 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.25■□□□□ 0.35
SIPA1Q96FS4 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.25■□□□□ 0.35
SIPA1Q96FS4 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SIPA1Q96FS4 ACTL9-202ENST00000612068 1252 ntBASIC17.25■□□□□ 0.35
SIPA1Q96FS4 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.25■□□□□ 0.35
SIPA1Q96FS4 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.25■□□□□ 0.35
SIPA1Q96FS4 AC092902.6-201ENST00000641783 218 ntBASIC17.25■□□□□ 0.35
SIPA1Q96FS4 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SIPA1Q96FS4 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.25■□□□□ 0.35
SIPA1Q96FS4 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SIPA1Q96FS4 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SIPA1Q96FS4 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.25■□□□□ 0.35
SIPA1Q96FS4 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SIPA1Q96FS4 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SIPA1Q96FS4 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SIPA1Q96FS4 NEFHP1-201ENST00000412845 2629 ntBASIC17.24■□□□□ 0.35
SIPA1Q96FS4 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SIPA1Q96FS4 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.24■□□□□ 0.35
SIPA1Q96FS4 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SIPA1Q96FS4 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SIPA1Q96FS4 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SIPA1Q96FS4 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SIPA1Q96FS4 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SIPA1Q96FS4 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SIPA1Q96FS4 AL645939.2-201ENST00000427340 991 ntBASIC17.24■□□□□ 0.35
SIPA1Q96FS4 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.24■□□□□ 0.35
SIPA1Q96FS4 SLC25A6P2-201ENST00000497974 877 ntBASIC17.24■□□□□ 0.35
SIPA1Q96FS4 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.24■□□□□ 0.35
SIPA1Q96FS4 RFPL4AP1-201ENST00000530883 850 ntBASIC17.24■□□□□ 0.35
SIPA1Q96FS4 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.24■□□□□ 0.35
SIPA1Q96FS4 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SIPA1Q96FS4 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.24■□□□□ 0.35
SIPA1Q96FS4 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.24■□□□□ 0.35
SIPA1Q96FS4 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.24■□□□□ 0.35
SIPA1Q96FS4 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.24■□□□□ 0.35
SIPA1Q96FS4 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SIPA1Q96FS4 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SIPA1Q96FS4 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SIPA1Q96FS4 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SIPA1Q96FS4 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.24■□□□□ 0.35
SIPA1Q96FS4 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SIPA1Q96FS4 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SIPA1Q96FS4 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.24■□□□□ 0.35
SIPA1Q96FS4 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.24■□□□□ 0.35
SIPA1Q96FS4 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SIPA1Q96FS4 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.24■□□□□ 0.35
SIPA1Q96FS4 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SIPA1Q96FS4 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
SIPA1Q96FS4 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.24■□□□□ 0.35
SIPA1Q96FS4 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.24■□□□□ 0.35
SIPA1Q96FS4 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SIPA1Q96FS4 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SIPA1Q96FS4 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SIPA1Q96FS4 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.23■□□□□ 0.35
SIPA1Q96FS4 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.23■□□□□ 0.35
SIPA1Q96FS4 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.23■□□□□ 0.35
SIPA1Q96FS4 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.23■□□□□ 0.35
SIPA1Q96FS4 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SIPA1Q96FS4 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SIPA1Q96FS4 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.23■□□□□ 0.35
SIPA1Q96FS4 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.23■□□□□ 0.35
SIPA1Q96FS4 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SIPA1Q96FS4 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SIPA1Q96FS4 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.23■□□□□ 0.35
SIPA1Q96FS4 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.23■□□□□ 0.35
SIPA1Q96FS4 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.23■□□□□ 0.35
SIPA1Q96FS4 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SIPA1Q96FS4 CYMP-203ENST00000474680 1263 ntBASIC17.23■□□□□ 0.35
SIPA1Q96FS4 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.23■□□□□ 0.35
SIPA1Q96FS4 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.23■□□□□ 0.35
SIPA1Q96FS4 AC027612.4-201ENST00000605371 583 ntBASIC17.23■□□□□ 0.35
SIPA1Q96FS4 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SIPA1Q96FS4 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SIPA1Q96FS4 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SIPA1Q96FS4 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.23■□□□□ 0.35
SIPA1Q96FS4 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
SIPA1Q96FS4 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.23■□□□□ 0.35
SIPA1Q96FS4 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SIPA1Q96FS4 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.23■□□□□ 0.35
SIPA1Q96FS4 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SIPA1Q96FS4 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SIPA1Q96FS4 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SIPA1Q96FS4 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
SIPA1Q96FS4 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.22■□□□□ 0.35
SIPA1Q96FS4 LINC00304-203ENST00000565008 1864 ntBASIC17.22■□□□□ 0.35
SIPA1Q96FS4 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SIPA1Q96FS4 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
SIPA1Q96FS4 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SIPA1Q96FS4 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SIPA1Q96FS4 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.22■□□□□ 0.35
SIPA1Q96FS4 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.22■□□□□ 0.35
SIPA1Q96FS4 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SIPA1Q96FS4 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
SIPA1Q96FS4 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.22■□□□□ 0.35
SIPA1Q96FS4 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SIPA1Q96FS4 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SIPA1Q96FS4 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SIPA1Q96FS4 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms