Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 IFNL4P1-201ENST00000607083 540 ntBASIC17.57■□□□□ 0.4
RTP4Q96DX8 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RTP4Q96DX8 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RTP4Q96DX8 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.57■□□□□ 0.4
RTP4Q96DX8 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTP4Q96DX8 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
RTP4Q96DX8 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTP4Q96DX8 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RTP4Q96DX8 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.57■□□□□ 0.4
RTP4Q96DX8 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
RTP4Q96DX8 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.57■□□□□ 0.4
RTP4Q96DX8 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RTP4Q96DX8 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.57■□□□□ 0.4
RTP4Q96DX8 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
RTP4Q96DX8 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTP4Q96DX8 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTP4Q96DX8 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RTP4Q96DX8 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTP4Q96DX8 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RTP4Q96DX8 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
RTP4Q96DX8 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.56■□□□□ 0.4
RTP4Q96DX8 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RTP4Q96DX8 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTP4Q96DX8 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTP4Q96DX8 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RTP4Q96DX8 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
RTP4Q96DX8 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
RTP4Q96DX8 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
RTP4Q96DX8 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTP4Q96DX8 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTP4Q96DX8 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.56■□□□□ 0.4
RTP4Q96DX8 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.56■□□□□ 0.4
RTP4Q96DX8 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTP4Q96DX8 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RTP4Q96DX8 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.56■□□□□ 0.4
RTP4Q96DX8 TSPY19P-201ENST00000418461 509 ntBASIC17.56■□□□□ 0.4
RTP4Q96DX8 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.56■□□□□ 0.4
RTP4Q96DX8 TSPY18P-201ENST00000441642 509 ntBASIC17.56■□□□□ 0.4
RTP4Q96DX8 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.56■□□□□ 0.4
RTP4Q96DX8 AL732292.2-201ENST00000609649 430 ntBASIC17.56■□□□□ 0.4
RTP4Q96DX8 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTP4Q96DX8 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.56■□□□□ 0.4
RTP4Q96DX8 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.56■□□□□ 0.4
RTP4Q96DX8 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTP4Q96DX8 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.56■□□□□ 0.4
RTP4Q96DX8 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.55■□□□□ 0.4
RTP4Q96DX8 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTP4Q96DX8 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTP4Q96DX8 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTP4Q96DX8 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTP4Q96DX8 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTP4Q96DX8 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTP4Q96DX8 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
RTP4Q96DX8 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTP4Q96DX8 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.55■□□□□ 0.4
RTP4Q96DX8 TUBB8P12-201ENST00000308911 1335 ntBASIC17.55■□□□□ 0.4
RTP4Q96DX8 TUBB7P-202ENST00000428444 1305 ntBASIC17.55■□□□□ 0.4
RTP4Q96DX8 TUBB8P7-204ENST00000567960 1332 ntBASIC17.55■□□□□ 0.4
RTP4Q96DX8 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
RTP4Q96DX8 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTP4Q96DX8 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
RTP4Q96DX8 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTP4Q96DX8 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTP4Q96DX8 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTP4Q96DX8 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.55■□□□□ 0.4
RTP4Q96DX8 AP002414.1-201ENST00000391405 1147 ntBASIC17.55■□□□□ 0.4
RTP4Q96DX8 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RTP4Q96DX8 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.55■□□□□ 0.4
RTP4Q96DX8 FDX1P1-201ENST00000449115 551 ntBASIC17.55■□□□□ 0.4
RTP4Q96DX8 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.55■□□□□ 0.4
RTP4Q96DX8 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.55■□□□□ 0.4
RTP4Q96DX8 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.55■□□□□ 0.4
RTP4Q96DX8 AC099336.1-202ENST00000602961 463 ntBASIC17.55■□□□□ 0.4
RTP4Q96DX8 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RTP4Q96DX8 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
RTP4Q96DX8 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
RTP4Q96DX8 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
RTP4Q96DX8 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.55■□□□□ 0.4
RTP4Q96DX8 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.55■□□□□ 0.4
RTP4Q96DX8 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.55■□□□□ 0.4
RTP4Q96DX8 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.55■□□□□ 0.4
RTP4Q96DX8 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTP4Q96DX8 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RTP4Q96DX8 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.55■□□□□ 0.4
RTP4Q96DX8 AC090340.1-201ENST00000620778 4980 ntBASIC17.55■□□□□ 0.4
RTP4Q96DX8 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTP4Q96DX8 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTP4Q96DX8 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTP4Q96DX8 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTP4Q96DX8 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
RTP4Q96DX8 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTP4Q96DX8 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.54■□□□□ 0.4
RTP4Q96DX8 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTP4Q96DX8 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTP4Q96DX8 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RTP4Q96DX8 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.54■□□□□ 0.4
RTP4Q96DX8 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTP4Q96DX8 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
RTP4Q96DX8 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTP4Q96DX8 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms