Protein–RNA interactions for Protein: Q96CP6

GRAMD1A, GRAM domain-containing protein 1A, humanhuman

Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1AQ96CP6 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
GRAMD1AQ96CP6 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
GRAMD1AQ96CP6 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GRAMD1AQ96CP6 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.74■□□□□ 0.43
GRAMD1AQ96CP6 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.74■□□□□ 0.43
GRAMD1AQ96CP6 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
GRAMD1AQ96CP6 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
GRAMD1AQ96CP6 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.74■□□□□ 0.43
GRAMD1AQ96CP6 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GRAMD1AQ96CP6 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GRAMD1AQ96CP6 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.74■□□□□ 0.43
GRAMD1AQ96CP6 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GRAMD1AQ96CP6 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GRAMD1AQ96CP6 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GRAMD1AQ96CP6 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
GRAMD1AQ96CP6 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
GRAMD1AQ96CP6 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GRAMD1AQ96CP6 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.73■□□□□ 0.43
GRAMD1AQ96CP6 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
GRAMD1AQ96CP6 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GRAMD1AQ96CP6 AL603756.1-201ENST00000606511 2163 ntBASIC17.73■□□□□ 0.43
GRAMD1AQ96CP6 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
GRAMD1AQ96CP6 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GRAMD1AQ96CP6 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GRAMD1AQ96CP6 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
GRAMD1AQ96CP6 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GRAMD1AQ96CP6 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
GRAMD1AQ96CP6 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GRAMD1AQ96CP6 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.73■□□□□ 0.43
GRAMD1AQ96CP6 IGHGP-201ENST00000390555 1178 ntBASIC17.73■□□□□ 0.43
GRAMD1AQ96CP6 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.73■□□□□ 0.43
GRAMD1AQ96CP6 AC079781.3-201ENST00000449110 356 ntBASIC17.73■□□□□ 0.43
GRAMD1AQ96CP6 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GRAMD1AQ96CP6 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.73■□□□□ 0.43
GRAMD1AQ96CP6 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
GRAMD1AQ96CP6 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.73■□□□□ 0.43
GRAMD1AQ96CP6 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.73■□□□□ 0.43
GRAMD1AQ96CP6 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.73■□□□□ 0.43
GRAMD1AQ96CP6 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GRAMD1AQ96CP6 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
GRAMD1AQ96CP6 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
GRAMD1AQ96CP6 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
GRAMD1AQ96CP6 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GRAMD1AQ96CP6 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GRAMD1AQ96CP6 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.73■□□□□ 0.43
GRAMD1AQ96CP6 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.73■□□□□ 0.43
GRAMD1AQ96CP6 FLJ38576-201ENST00000623820 2459 ntBASIC17.73■□□□□ 0.43
GRAMD1AQ96CP6 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GRAMD1AQ96CP6 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GRAMD1AQ96CP6 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.72■□□□□ 0.43
GRAMD1AQ96CP6 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GRAMD1AQ96CP6 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
GRAMD1AQ96CP6 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.72■□□□□ 0.43
GRAMD1AQ96CP6 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
GRAMD1AQ96CP6 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GRAMD1AQ96CP6 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GRAMD1AQ96CP6 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.72■□□□□ 0.43
GRAMD1AQ96CP6 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GRAMD1AQ96CP6 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
GRAMD1AQ96CP6 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
GRAMD1AQ96CP6 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GRAMD1AQ96CP6 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.72■□□□□ 0.43
GRAMD1AQ96CP6 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GRAMD1AQ96CP6 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GRAMD1AQ96CP6 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.72■□□□□ 0.43
GRAMD1AQ96CP6 SLC25A6P4-201ENST00000586535 553 ntBASIC17.72■□□□□ 0.43
GRAMD1AQ96CP6 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.72■□□□□ 0.43
GRAMD1AQ96CP6 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.72■□□□□ 0.43
GRAMD1AQ96CP6 AC024563.2-201ENST00000603282 481 ntBASIC17.72■□□□□ 0.43
GRAMD1AQ96CP6 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GRAMD1AQ96CP6 AC023511.2-201ENST00000618803 211 ntBASIC17.72■□□□□ 0.43
GRAMD1AQ96CP6 AC117500.6-201ENST00000624871 588 ntBASIC17.72■□□□□ 0.43
GRAMD1AQ96CP6 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.72■□□□□ 0.43
GRAMD1AQ96CP6 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
GRAMD1AQ96CP6 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
GRAMD1AQ96CP6 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
GRAMD1AQ96CP6 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.72■□□□□ 0.43
GRAMD1AQ96CP6 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
GRAMD1AQ96CP6 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GRAMD1AQ96CP6 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GRAMD1AQ96CP6 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.72■□□□□ 0.43
GRAMD1AQ96CP6 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
GRAMD1AQ96CP6 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.71■□□□□ 0.43
GRAMD1AQ96CP6 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.71■□□□□ 0.43
GRAMD1AQ96CP6 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GRAMD1AQ96CP6 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
GRAMD1AQ96CP6 AC099343.3-201ENST00000605834 2503 ntBASIC17.71■□□□□ 0.43
GRAMD1AQ96CP6 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.71■□□□□ 0.43
GRAMD1AQ96CP6 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GRAMD1AQ96CP6 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
GRAMD1AQ96CP6 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GRAMD1AQ96CP6 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GRAMD1AQ96CP6 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GRAMD1AQ96CP6 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GRAMD1AQ96CP6 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
GRAMD1AQ96CP6 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GRAMD1AQ96CP6 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.71■□□□□ 0.43
GRAMD1AQ96CP6 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
GRAMD1AQ96CP6 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GRAMD1AQ96CP6 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms