Protein–RNA interactions for Protein: Q92995

USP13, Ubiquitin carboxyl-terminal hydrolase 13, humanhuman

Predicted RBP Predictions only

Length 863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP13Q92995 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP13Q92995 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.07■□□□□ 0.48
USP13Q92995 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
USP13Q92995 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.07■□□□□ 0.48
USP13Q92995 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.07■□□□□ 0.48
USP13Q92995 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.07■□□□□ 0.48
USP13Q92995 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.07■□□□□ 0.48
USP13Q92995 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.07■□□□□ 0.48
USP13Q92995 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.07■□□□□ 0.48
USP13Q92995 AL353135.1-201ENST00000606729 504 ntBASIC18.07■□□□□ 0.48
USP13Q92995 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP13Q92995 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
USP13Q92995 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
USP13Q92995 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.07■□□□□ 0.48
USP13Q92995 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
USP13Q92995 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP13Q92995 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP13Q92995 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
USP13Q92995 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
USP13Q92995 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.07■□□□□ 0.48
USP13Q92995 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP13Q92995 GPR89P-201ENST00000407924 1495 ntBASIC18.07■□□□□ 0.48
USP13Q92995 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
USP13Q92995 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
USP13Q92995 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
USP13Q92995 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
USP13Q92995 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
USP13Q92995 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.06■□□□□ 0.48
USP13Q92995 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP13Q92995 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP13Q92995 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.06■□□□□ 0.48
USP13Q92995 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
USP13Q92995 PTCHD3P3-201ENST00000403073 906 ntBASIC18.06■□□□□ 0.48
USP13Q92995 RPS8P6-201ENST00000426177 609 ntBASIC18.06■□□□□ 0.48
USP13Q92995 AC004967.1-201ENST00000453589 447 ntBASIC18.06■□□□□ 0.48
USP13Q92995 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.06■□□□□ 0.48
USP13Q92995 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.06■□□□□ 0.48
USP13Q92995 AC018845.2-201ENST00000568326 409 ntBASIC18.06■□□□□ 0.48
USP13Q92995 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
USP13Q92995 AP001160.2-201ENST00000596071 487 ntBASIC18.06■□□□□ 0.48
USP13Q92995 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.06■□□□□ 0.48
USP13Q92995 AC092865.6-201ENST00000642101 219 ntBASIC18.06■□□□□ 0.48
USP13Q92995 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP13Q92995 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP13Q92995 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
USP13Q92995 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
USP13Q92995 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
USP13Q92995 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP13Q92995 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
USP13Q92995 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.06■□□□□ 0.48
USP13Q92995 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP13Q92995 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP13Q92995 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.06■□□□□ 0.48
USP13Q92995 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP13Q92995 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP13Q92995 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP13Q92995 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
USP13Q92995 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP13Q92995 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
USP13Q92995 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
USP13Q92995 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
USP13Q92995 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
USP13Q92995 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.05■□□□□ 0.48
USP13Q92995 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP13Q92995 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP13Q92995 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
USP13Q92995 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP13Q92995 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP13Q92995 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP13Q92995 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.05■□□□□ 0.48
USP13Q92995 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.05■□□□□ 0.48
USP13Q92995 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
USP13Q92995 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.05■□□□□ 0.48
USP13Q92995 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP13Q92995 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP13Q92995 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP13Q92995 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.05■□□□□ 0.48
USP13Q92995 MCCD1P2-201ENST00000423228 335 ntBASIC18.05■□□□□ 0.48
USP13Q92995 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.05■□□□□ 0.48
USP13Q92995 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.05■□□□□ 0.48
USP13Q92995 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.05■□□□□ 0.48
USP13Q92995 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.05■□□□□ 0.48
USP13Q92995 AC134684.3-201ENST00000641758 218 ntBASIC18.05■□□□□ 0.48
USP13Q92995 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
USP13Q92995 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP13Q92995 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.05■□□□□ 0.48
USP13Q92995 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP13Q92995 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.05■□□□□ 0.48
USP13Q92995 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.05■□□□□ 0.48
USP13Q92995 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.05■□□□□ 0.48
USP13Q92995 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP13Q92995 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
USP13Q92995 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP13Q92995 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
USP13Q92995 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP13Q92995 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP13Q92995 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP13Q92995 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP13Q92995 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
USP13Q92995 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms