Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RTN4IP1Q8WWV3 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
RTN4IP1Q8WWV3 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.56□□□□□ -0.08
RTN4IP1Q8WWV3 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RTN4IP1Q8WWV3 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
RTN4IP1Q8WWV3 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
RTN4IP1Q8WWV3 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
RTN4IP1Q8WWV3 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RTN4IP1Q8WWV3 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RTN4IP1Q8WWV3 BAALC-202ENST00000306391 243 ntTSL 5 BASIC14.56□□□□□ -0.08
RTN4IP1Q8WWV3 BAALC-204ENST00000330955 222 ntTSL 5 BASIC14.56□□□□□ -0.08
RTN4IP1Q8WWV3 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC14.56□□□□□ -0.08
RTN4IP1Q8WWV3 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RTN4IP1Q8WWV3 NTF6B-201ENST00000591913 560 ntBASIC14.56□□□□□ -0.08
RTN4IP1Q8WWV3 AL390719.2-201ENST00000606993 987 ntBASIC14.56□□□□□ -0.08
RTN4IP1Q8WWV3 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC14.56□□□□□ -0.08
RTN4IP1Q8WWV3 AL590326.2-201ENST00000625139 305 ntBASIC14.56□□□□□ -0.08
RTN4IP1Q8WWV3 ANKRD20A8P-203ENST00000641373 517 ntBASIC14.56□□□□□ -0.08
RTN4IP1Q8WWV3 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RTN4IP1Q8WWV3 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RTN4IP1Q8WWV3 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.56□□□□□ -0.08
RTN4IP1Q8WWV3 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RTN4IP1Q8WWV3 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
RTN4IP1Q8WWV3 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RTN4IP1Q8WWV3 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
RTN4IP1Q8WWV3 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RTN4IP1Q8WWV3 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.56□□□□□ -0.08
RTN4IP1Q8WWV3 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.56□□□□□ -0.08
RTN4IP1Q8WWV3 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.56□□□□□ -0.08
RTN4IP1Q8WWV3 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RTN4IP1Q8WWV3 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RTN4IP1Q8WWV3 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.56□□□□□ -0.08
RTN4IP1Q8WWV3 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
RTN4IP1Q8WWV3 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RTN4IP1Q8WWV3 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
RTN4IP1Q8WWV3 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.55□□□□□ -0.08
RTN4IP1Q8WWV3 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RTN4IP1Q8WWV3 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RTN4IP1Q8WWV3 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.55□□□□□ -0.08
RTN4IP1Q8WWV3 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC14.55□□□□□ -0.08
RTN4IP1Q8WWV3 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
RTN4IP1Q8WWV3 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RTN4IP1Q8WWV3 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RTN4IP1Q8WWV3 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RTN4IP1Q8WWV3 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.55□□□□□ -0.08
RTN4IP1Q8WWV3 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
RTN4IP1Q8WWV3 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RTN4IP1Q8WWV3 AL031133.1-201ENST00000406807 723 ntBASIC14.55□□□□□ -0.08
RTN4IP1Q8WWV3 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
RTN4IP1Q8WWV3 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC14.55□□□□□ -0.08
RTN4IP1Q8WWV3 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RTN4IP1Q8WWV3 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC14.55□□□□□ -0.08
RTN4IP1Q8WWV3 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC14.55□□□□□ -0.08
RTN4IP1Q8WWV3 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC14.55□□□□□ -0.08
RTN4IP1Q8WWV3 AL136038.3-201ENST00000561909 1096 ntBASIC14.55□□□□□ -0.08
RTN4IP1Q8WWV3 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
RTN4IP1Q8WWV3 RNF126P1-202ENST00000569893 925 ntBASIC14.55□□□□□ -0.08
RTN4IP1Q8WWV3 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC14.55□□□□□ -0.08
RTN4IP1Q8WWV3 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RTN4IP1Q8WWV3 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RTN4IP1Q8WWV3 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.55□□□□□ -0.08
RTN4IP1Q8WWV3 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RTN4IP1Q8WWV3 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
RTN4IP1Q8WWV3 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
RTN4IP1Q8WWV3 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.55□□□□□ -0.08
RTN4IP1Q8WWV3 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RTN4IP1Q8WWV3 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RTN4IP1Q8WWV3 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RTN4IP1Q8WWV3 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RTN4IP1Q8WWV3 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RTN4IP1Q8WWV3 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
RTN4IP1Q8WWV3 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RTN4IP1Q8WWV3 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RTN4IP1Q8WWV3 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RTN4IP1Q8WWV3 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RTN4IP1Q8WWV3 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RTN4IP1Q8WWV3 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RTN4IP1Q8WWV3 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RTN4IP1Q8WWV3 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RTN4IP1Q8WWV3 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
RTN4IP1Q8WWV3 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RTN4IP1Q8WWV3 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
RTN4IP1Q8WWV3 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RTN4IP1Q8WWV3 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
RTN4IP1Q8WWV3 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
RTN4IP1Q8WWV3 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.54□□□□□ -0.08
RTN4IP1Q8WWV3 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RTN4IP1Q8WWV3 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
RTN4IP1Q8WWV3 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RTN4IP1Q8WWV3 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RTN4IP1Q8WWV3 AC005104.2-201ENST00000427818 678 ntBASIC14.54□□□□□ -0.08
RTN4IP1Q8WWV3 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC14.54□□□□□ -0.08
RTN4IP1Q8WWV3 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC14.54□□□□□ -0.08
RTN4IP1Q8WWV3 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC14.54□□□□□ -0.08
RTN4IP1Q8WWV3 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC14.54□□□□□ -0.08
RTN4IP1Q8WWV3 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
RTN4IP1Q8WWV3 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC14.54□□□□□ -0.08
RTN4IP1Q8WWV3 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RTN4IP1Q8WWV3 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC14.54□□□□□ -0.08
RTN4IP1Q8WWV3 AL121956.5-201ENST00000625261 221 ntBASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms