Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC29.41■■■□□ 2.3
TRIM41Q8WV44 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC29.41■■■□□ 2.3
TRIM41Q8WV44 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC29.41■■■□□ 2.3
TRIM41Q8WV44 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC29.41■■■□□ 2.3
TRIM41Q8WV44 PGM5P2-202ENST00000637225 1043 ntBASIC29.41■■■□□ 2.3
TRIM41Q8WV44 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC29.41■■■□□ 2.3
TRIM41Q8WV44 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC29.41■■■□□ 2.3
TRIM41Q8WV44 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC29.41■■■□□ 2.3
TRIM41Q8WV44 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC29.4■■■□□ 2.3
TRIM41Q8WV44 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC29.4■■■□□ 2.3
TRIM41Q8WV44 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC29.4■■■□□ 2.3
TRIM41Q8WV44 ETFA-208ENST00000559602 792 ntTSL 3 BASIC29.4■■■□□ 2.3
TRIM41Q8WV44 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC29.4■■■□□ 2.3
TRIM41Q8WV44 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC29.4■■■□□ 2.3
TRIM41Q8WV44 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
TRIM41Q8WV44 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC29.4■■■□□ 2.3
TRIM41Q8WV44 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC29.4■■■□□ 2.3
TRIM41Q8WV44 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
TRIM41Q8WV44 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC29.4■■■□□ 2.3
TRIM41Q8WV44 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC29.4■■■□□ 2.3
TRIM41Q8WV44 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC29.4■■■□□ 2.3
TRIM41Q8WV44 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC29.4■■■□□ 2.3
TRIM41Q8WV44 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC29.4■■■□□ 2.3
TRIM41Q8WV44 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC29.4■■■□□ 2.3
TRIM41Q8WV44 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
TRIM41Q8WV44 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC29.4■■■□□ 2.3
TRIM41Q8WV44 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC29.39■■■□□ 2.3
TRIM41Q8WV44 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC29.39■■■□□ 2.3
TRIM41Q8WV44 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC29.39■■■□□ 2.3
TRIM41Q8WV44 AC046185.3-201ENST00000623228 1824 ntBASIC29.39■■■□□ 2.3
TRIM41Q8WV44 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC29.39■■■□□ 2.3
TRIM41Q8WV44 ARTN-206ENST00000472435 402 ntTSL 3 BASIC29.39■■■□□ 2.3
TRIM41Q8WV44 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
TRIM41Q8WV44 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC29.39■■■□□ 2.3
TRIM41Q8WV44 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC29.39■■■□□ 2.3
TRIM41Q8WV44 AC010336.2-201ENST00000564226 506 ntBASIC29.39■■■□□ 2.3
TRIM41Q8WV44 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC29.39■■■□□ 2.3
TRIM41Q8WV44 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
TRIM41Q8WV44 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC29.39■■■□□ 2.3
TRIM41Q8WV44 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC29.39■■■□□ 2.29
TRIM41Q8WV44 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC29.39■■■□□ 2.29
TRIM41Q8WV44 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC29.39■■■□□ 2.29
TRIM41Q8WV44 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.29
TRIM41Q8WV44 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC29.39■■■□□ 2.29
TRIM41Q8WV44 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC29.38■■■□□ 2.29
TRIM41Q8WV44 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
TRIM41Q8WV44 AC018470.1-201ENST00000624790 3129 ntBASIC29.38■■■□□ 2.29
TRIM41Q8WV44 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
TRIM41Q8WV44 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
TRIM41Q8WV44 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC29.38■■■□□ 2.29
TRIM41Q8WV44 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
TRIM41Q8WV44 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC29.38■■■□□ 2.29
TRIM41Q8WV44 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC29.38■■■□□ 2.29
TRIM41Q8WV44 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC29.38■■■□□ 2.29
TRIM41Q8WV44 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC29.38■■■□□ 2.29
TRIM41Q8WV44 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
TRIM41Q8WV44 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC29.38■■■□□ 2.29
TRIM41Q8WV44 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC29.38■■■□□ 2.29
TRIM41Q8WV44 ACTG1P14-201ENST00000446382 1122 ntBASIC29.38■■■□□ 2.29
TRIM41Q8WV44 AC015911.4-201ENST00000588022 1070 ntBASIC29.38■■■□□ 2.29
TRIM41Q8WV44 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC29.38■■■□□ 2.29
TRIM41Q8WV44 AL662799.1-202ENST00000614205 422 ntBASIC29.38■■■□□ 2.29
TRIM41Q8WV44 AC105339.1-204ENST00000636249 355 ntBASIC29.38■■■□□ 2.29
TRIM41Q8WV44 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC29.38■■■□□ 2.29
TRIM41Q8WV44 LYSMD4-203ENST00000378904 2122 ntBASIC29.38■■■□□ 2.29
TRIM41Q8WV44 GATB-213ENST00000515812 1893 ntTSL 5 BASIC29.38■■■□□ 2.29
TRIM41Q8WV44 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC29.38■■■□□ 2.29
TRIM41Q8WV44 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC29.37■■■□□ 2.29
TRIM41Q8WV44 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
TRIM41Q8WV44 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC29.37■■■□□ 2.29
TRIM41Q8WV44 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC29.37■■■□□ 2.29
TRIM41Q8WV44 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
TRIM41Q8WV44 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
TRIM41Q8WV44 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
TRIM41Q8WV44 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
TRIM41Q8WV44 ENSA-206ENST00000361631 725 ntTSL 2 BASIC29.37■■■□□ 2.29
TRIM41Q8WV44 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
TRIM41Q8WV44 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC29.37■■■□□ 2.29
TRIM41Q8WV44 LINC00982-205ENST00000420957 435 ntBASIC29.37■■■□□ 2.29
TRIM41Q8WV44 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC29.37■■■□□ 2.29
TRIM41Q8WV44 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC29.37■■■□□ 2.29
TRIM41Q8WV44 AC136632.2-201ENST00000512891 861 ntBASIC29.37■■■□□ 2.29
TRIM41Q8WV44 COQ6-210ENST00000554920 649 ntTSL 3 BASIC29.37■■■□□ 2.29
TRIM41Q8WV44 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC29.37■■■□□ 2.29
TRIM41Q8WV44 MIR4525-201ENST00000580000 75 ntBASIC29.37■■■□□ 2.29
TRIM41Q8WV44 TMEM261P1-201ENST00000604899 340 ntBASIC29.37■■■□□ 2.29
TRIM41Q8WV44 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC29.37■■■□□ 2.29
TRIM41Q8WV44 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC29.37■■■□□ 2.29
TRIM41Q8WV44 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
TRIM41Q8WV44 AL135999.2-201ENST00000622438 1686 ntBASIC29.37■■■□□ 2.29
TRIM41Q8WV44 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC29.37■■■□□ 2.29
TRIM41Q8WV44 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC29.37■■■□□ 2.29
TRIM41Q8WV44 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC29.37■■■□□ 2.29
TRIM41Q8WV44 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
TRIM41Q8WV44 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC29.36■■■□□ 2.29
TRIM41Q8WV44 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC29.36■■■□□ 2.29
TRIM41Q8WV44 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC29.36■■■□□ 2.29
TRIM41Q8WV44 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC29.36■■■□□ 2.29
TRIM41Q8WV44 AC134043.2-201ENST00000624206 2238 ntBASIC29.36■■■□□ 2.29
TRIM41Q8WV44 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC29.36■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms