Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CHD5Q8TDI0 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.3■□□□□ 0.36
CHD5Q8TDI0 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.3■□□□□ 0.36
CHD5Q8TDI0 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.3■□□□□ 0.36
CHD5Q8TDI0 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CHD5Q8TDI0 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
CHD5Q8TDI0 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHD5Q8TDI0 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CHD5Q8TDI0 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
CHD5Q8TDI0 VN2R19P-201ENST00000442399 1052 ntBASIC17.3■□□□□ 0.36
CHD5Q8TDI0 ALG1L5P-201ENST00000482043 771 ntBASIC17.3■□□□□ 0.36
CHD5Q8TDI0 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHD5Q8TDI0 RNA5SP416-201ENST00000516838 111 ntBASIC17.3■□□□□ 0.36
CHD5Q8TDI0 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CHD5Q8TDI0 PDPK2P-202ENST00000562415 1191 ntBASIC17.3■□□□□ 0.36
CHD5Q8TDI0 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.3■□□□□ 0.36
CHD5Q8TDI0 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.3■□□□□ 0.36
CHD5Q8TDI0 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHD5Q8TDI0 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.3■□□□□ 0.36
CHD5Q8TDI0 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHD5Q8TDI0 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.3■□□□□ 0.36
CHD5Q8TDI0 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHD5Q8TDI0 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHD5Q8TDI0 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHD5Q8TDI0 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHD5Q8TDI0 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHD5Q8TDI0 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHD5Q8TDI0 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.29■□□□□ 0.36
CHD5Q8TDI0 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHD5Q8TDI0 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHD5Q8TDI0 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHD5Q8TDI0 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.29■□□□□ 0.36
CHD5Q8TDI0 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.29■□□□□ 0.36
CHD5Q8TDI0 AC092865.6-201ENST00000642101 219 ntBASIC17.29■□□□□ 0.36
CHD5Q8TDI0 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.29■□□□□ 0.36
CHD5Q8TDI0 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.29■□□□□ 0.36
CHD5Q8TDI0 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHD5Q8TDI0 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.29■□□□□ 0.36
CHD5Q8TDI0 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.29■□□□□ 0.36
CHD5Q8TDI0 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.29■□□□□ 0.36
CHD5Q8TDI0 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHD5Q8TDI0 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHD5Q8TDI0 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHD5Q8TDI0 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.29■□□□□ 0.36
CHD5Q8TDI0 AC080080.1-201ENST00000625121 2420 ntBASIC17.29■□□□□ 0.36
CHD5Q8TDI0 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.29■□□□□ 0.36
CHD5Q8TDI0 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHD5Q8TDI0 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHD5Q8TDI0 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
CHD5Q8TDI0 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.29■□□□□ 0.36
CHD5Q8TDI0 AL513480.1-201ENST00000451731 511 ntBASIC17.29■□□□□ 0.36
CHD5Q8TDI0 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.29■□□□□ 0.36
CHD5Q8TDI0 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.29■□□□□ 0.36
CHD5Q8TDI0 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.29■□□□□ 0.36
CHD5Q8TDI0 AC040169.1-201ENST00000565382 521 ntBASIC17.29■□□□□ 0.36
CHD5Q8TDI0 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHD5Q8TDI0 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.29■□□□□ 0.36
CHD5Q8TDI0 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHD5Q8TDI0 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CHD5Q8TDI0 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
CHD5Q8TDI0 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHD5Q8TDI0 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CHD5Q8TDI0 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CHD5Q8TDI0 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHD5Q8TDI0 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHD5Q8TDI0 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHD5Q8TDI0 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHD5Q8TDI0 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHD5Q8TDI0 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHD5Q8TDI0 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHD5Q8TDI0 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHD5Q8TDI0 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
CHD5Q8TDI0 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHD5Q8TDI0 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.28■□□□□ 0.36
CHD5Q8TDI0 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.28■□□□□ 0.36
CHD5Q8TDI0 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
CHD5Q8TDI0 KRT8P49-201ENST00000604166 1432 ntBASIC17.28■□□□□ 0.36
CHD5Q8TDI0 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHD5Q8TDI0 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHD5Q8TDI0 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHD5Q8TDI0 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.28■□□□□ 0.36
CHD5Q8TDI0 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.28■□□□□ 0.36
CHD5Q8TDI0 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.28■□□□□ 0.36
CHD5Q8TDI0 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.28■□□□□ 0.36
CHD5Q8TDI0 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
CHD5Q8TDI0 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.28■□□□□ 0.36
CHD5Q8TDI0 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHD5Q8TDI0 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHD5Q8TDI0 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHD5Q8TDI0 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHD5Q8TDI0 LINC00895-201ENST00000629028 1637 ntBASIC17.28■□□□□ 0.36
CHD5Q8TDI0 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHD5Q8TDI0 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHD5Q8TDI0 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHD5Q8TDI0 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHD5Q8TDI0 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHD5Q8TDI0 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CHD5Q8TDI0 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHD5Q8TDI0 AC023274.1-201ENST00000418278 595 ntBASIC17.28■□□□□ 0.36
CHD5Q8TDI0 MCCD1P2-201ENST00000423228 335 ntBASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms