Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB3IL1Q8TBN0 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB3IL1Q8TBN0 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB3IL1Q8TBN0 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.24■□□□□ 0.35
RAB3IL1Q8TBN0 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB3IL1Q8TBN0 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.24■□□□□ 0.35
RAB3IL1Q8TBN0 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.24■□□□□ 0.35
RAB3IL1Q8TBN0 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB3IL1Q8TBN0 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
RAB3IL1Q8TBN0 AC026691.1-201ENST00000602502 2017 ntBASIC17.24■□□□□ 0.35
RAB3IL1Q8TBN0 CYP2T1P-202ENST00000641596 2535 ntBASIC17.24■□□□□ 0.35
RAB3IL1Q8TBN0 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB3IL1Q8TBN0 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.24■□□□□ 0.35
RAB3IL1Q8TBN0 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB3IL1Q8TBN0 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAB3IL1Q8TBN0 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.24■□□□□ 0.35
RAB3IL1Q8TBN0 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RAB3IL1Q8TBN0 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB3IL1Q8TBN0 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB3IL1Q8TBN0 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAB3IL1Q8TBN0 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.24■□□□□ 0.35
RAB3IL1Q8TBN0 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.24■□□□□ 0.35
RAB3IL1Q8TBN0 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAB3IL1Q8TBN0 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.23■□□□□ 0.35
RAB3IL1Q8TBN0 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC17.23■□□□□ 0.35
RAB3IL1Q8TBN0 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RAB3IL1Q8TBN0 PCDH8P1-201ENST00000428983 2773 ntBASIC17.23■□□□□ 0.35
RAB3IL1Q8TBN0 KRT17P2-201ENST00000300992 1314 ntBASIC17.23■□□□□ 0.35
RAB3IL1Q8TBN0 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.23■□□□□ 0.35
RAB3IL1Q8TBN0 AC092053.1-201ENST00000605787 1936 ntBASIC17.23■□□□□ 0.35
RAB3IL1Q8TBN0 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
RAB3IL1Q8TBN0 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB3IL1Q8TBN0 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.23■□□□□ 0.35
RAB3IL1Q8TBN0 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB3IL1Q8TBN0 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
RAB3IL1Q8TBN0 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAB3IL1Q8TBN0 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB3IL1Q8TBN0 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB3IL1Q8TBN0 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
RAB3IL1Q8TBN0 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB3IL1Q8TBN0 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.23■□□□□ 0.35
RAB3IL1Q8TBN0 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.23■□□□□ 0.35
RAB3IL1Q8TBN0 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
RAB3IL1Q8TBN0 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB3IL1Q8TBN0 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB3IL1Q8TBN0 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RAB3IL1Q8TBN0 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.23■□□□□ 0.35
RAB3IL1Q8TBN0 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.23■□□□□ 0.35
RAB3IL1Q8TBN0 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.23■□□□□ 0.35
RAB3IL1Q8TBN0 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAB3IL1Q8TBN0 AC128688.1-201ENST00000487626 519 ntBASIC17.23■□□□□ 0.35
RAB3IL1Q8TBN0 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.23■□□□□ 0.35
RAB3IL1Q8TBN0 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.23■□□□□ 0.35
RAB3IL1Q8TBN0 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAB3IL1Q8TBN0 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.23■□□□□ 0.35
RAB3IL1Q8TBN0 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.23■□□□□ 0.35
RAB3IL1Q8TBN0 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB3IL1Q8TBN0 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
RAB3IL1Q8TBN0 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB3IL1Q8TBN0 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.23■□□□□ 0.35
RAB3IL1Q8TBN0 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB3IL1Q8TBN0 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RAB3IL1Q8TBN0 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAB3IL1Q8TBN0 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB3IL1Q8TBN0 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB3IL1Q8TBN0 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB3IL1Q8TBN0 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.22■□□□□ 0.35
RAB3IL1Q8TBN0 TSPY26P-202ENST00000565928 3884 ntBASIC17.22■□□□□ 0.35
RAB3IL1Q8TBN0 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAB3IL1Q8TBN0 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAB3IL1Q8TBN0 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.22■□□□□ 0.35
RAB3IL1Q8TBN0 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
RAB3IL1Q8TBN0 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.22■□□□□ 0.35
RAB3IL1Q8TBN0 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RAB3IL1Q8TBN0 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB3IL1Q8TBN0 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.22■□□□□ 0.35
RAB3IL1Q8TBN0 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
RAB3IL1Q8TBN0 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
RAB3IL1Q8TBN0 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB3IL1Q8TBN0 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB3IL1Q8TBN0 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB3IL1Q8TBN0 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAB3IL1Q8TBN0 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB3IL1Q8TBN0 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB3IL1Q8TBN0 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAB3IL1Q8TBN0 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB3IL1Q8TBN0 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.22■□□□□ 0.35
RAB3IL1Q8TBN0 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB3IL1Q8TBN0 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.22■□□□□ 0.35
RAB3IL1Q8TBN0 ECEL1P3-201ENST00000427961 737 ntBASIC17.22■□□□□ 0.35
RAB3IL1Q8TBN0 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.22■□□□□ 0.35
RAB3IL1Q8TBN0 TSPY15P-201ENST00000457163 923 ntBASIC17.22■□□□□ 0.35
RAB3IL1Q8TBN0 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
RAB3IL1Q8TBN0 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.22■□□□□ 0.35
RAB3IL1Q8TBN0 AP000525.1-201ENST00000608286 694 ntBASIC17.22■□□□□ 0.35
RAB3IL1Q8TBN0 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RAB3IL1Q8TBN0 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB3IL1Q8TBN0 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB3IL1Q8TBN0 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB3IL1Q8TBN0 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms