Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SHKBP1Q8TBC3 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.08■□□□□ 0.49
SHKBP1Q8TBC3 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SHKBP1Q8TBC3 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
SHKBP1Q8TBC3 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.08■□□□□ 0.49
SHKBP1Q8TBC3 BCAR1-209ENST00000546196 1340 ntBASIC18.08■□□□□ 0.49
SHKBP1Q8TBC3 AL590787.1-201ENST00000568856 1315 ntBASIC18.08■□□□□ 0.49
SHKBP1Q8TBC3 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.08■□□□□ 0.48
SHKBP1Q8TBC3 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
SHKBP1Q8TBC3 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SHKBP1Q8TBC3 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SHKBP1Q8TBC3 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.08■□□□□ 0.48
SHKBP1Q8TBC3 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.08■□□□□ 0.48
SHKBP1Q8TBC3 PDPK2P-202ENST00000562415 1191 ntBASIC18.08■□□□□ 0.48
SHKBP1Q8TBC3 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SHKBP1Q8TBC3 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.08■□□□□ 0.48
SHKBP1Q8TBC3 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.08■□□□□ 0.48
SHKBP1Q8TBC3 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SHKBP1Q8TBC3 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
SHKBP1Q8TBC3 PRORSD1P-202ENST00000563365 2154 ntBASIC18.08■□□□□ 0.48
SHKBP1Q8TBC3 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SHKBP1Q8TBC3 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.08■□□□□ 0.48
SHKBP1Q8TBC3 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SHKBP1Q8TBC3 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
SHKBP1Q8TBC3 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.08■□□□□ 0.48
SHKBP1Q8TBC3 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
SHKBP1Q8TBC3 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SHKBP1Q8TBC3 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SHKBP1Q8TBC3 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.08■□□□□ 0.48
SHKBP1Q8TBC3 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
SHKBP1Q8TBC3 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.08■□□□□ 0.48
SHKBP1Q8TBC3 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHKBP1Q8TBC3 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHKBP1Q8TBC3 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SHKBP1Q8TBC3 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.07■□□□□ 0.48
SHKBP1Q8TBC3 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
SHKBP1Q8TBC3 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.07■□□□□ 0.48
SHKBP1Q8TBC3 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SHKBP1Q8TBC3 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHKBP1Q8TBC3 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
SHKBP1Q8TBC3 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.07■□□□□ 0.48
SHKBP1Q8TBC3 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.07■□□□□ 0.48
SHKBP1Q8TBC3 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.07■□□□□ 0.48
SHKBP1Q8TBC3 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHKBP1Q8TBC3 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHKBP1Q8TBC3 PI4KAP1-204ENST00000612579 1703 ntBASIC18.07■□□□□ 0.48
SHKBP1Q8TBC3 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHKBP1Q8TBC3 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHKBP1Q8TBC3 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHKBP1Q8TBC3 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.07■□□□□ 0.48
SHKBP1Q8TBC3 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SHKBP1Q8TBC3 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.07■□□□□ 0.48
SHKBP1Q8TBC3 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SHKBP1Q8TBC3 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.07■□□□□ 0.48
SHKBP1Q8TBC3 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.07■□□□□ 0.48
SHKBP1Q8TBC3 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
SHKBP1Q8TBC3 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.07■□□□□ 0.48
SHKBP1Q8TBC3 RHOQP3-201ENST00000437982 621 ntBASIC18.07■□□□□ 0.48
SHKBP1Q8TBC3 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.07■□□□□ 0.48
SHKBP1Q8TBC3 KRT19P2-202ENST00000557173 1012 ntBASIC18.07■□□□□ 0.48
SHKBP1Q8TBC3 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.07■□□□□ 0.48
SHKBP1Q8TBC3 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.07■□□□□ 0.48
SHKBP1Q8TBC3 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHKBP1Q8TBC3 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHKBP1Q8TBC3 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHKBP1Q8TBC3 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHKBP1Q8TBC3 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHKBP1Q8TBC3 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHKBP1Q8TBC3 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SHKBP1Q8TBC3 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.07■□□□□ 0.48
SHKBP1Q8TBC3 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.07■□□□□ 0.48
SHKBP1Q8TBC3 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.07■□□□□ 0.48
SHKBP1Q8TBC3 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.07■□□□□ 0.48
SHKBP1Q8TBC3 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SHKBP1Q8TBC3 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.07■□□□□ 0.48
SHKBP1Q8TBC3 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
SHKBP1Q8TBC3 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHKBP1Q8TBC3 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.06■□□□□ 0.48
SHKBP1Q8TBC3 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHKBP1Q8TBC3 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SHKBP1Q8TBC3 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHKBP1Q8TBC3 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SHKBP1Q8TBC3 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHKBP1Q8TBC3 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SHKBP1Q8TBC3 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHKBP1Q8TBC3 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHKBP1Q8TBC3 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
SHKBP1Q8TBC3 HMGN1P19-201ENST00000436976 333 ntBASIC18.06■□□□□ 0.48
SHKBP1Q8TBC3 MKNK2P1-201ENST00000437526 628 ntBASIC18.06■□□□□ 0.48
SHKBP1Q8TBC3 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.06■□□□□ 0.48
SHKBP1Q8TBC3 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.06■□□□□ 0.48
SHKBP1Q8TBC3 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SHKBP1Q8TBC3 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
SHKBP1Q8TBC3 AL355385.1-201ENST00000606123 409 ntBASIC18.06■□□□□ 0.48
SHKBP1Q8TBC3 AC138028.4-201ENST00000564984 1845 ntBASIC18.06■□□□□ 0.48
SHKBP1Q8TBC3 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.06■□□□□ 0.48
SHKBP1Q8TBC3 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SHKBP1Q8TBC3 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.06■□□□□ 0.48
SHKBP1Q8TBC3 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHKBP1Q8TBC3 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms