Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC10.68□□□□□ -0.7
SVIPQ8NHG7 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC10.68□□□□□ -0.7
SVIPQ8NHG7 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SVIPQ8NHG7 EIF3C-209ENST00000566501 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SVIPQ8NHG7 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC10.68□□□□□ -0.7
SVIPQ8NHG7 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SVIPQ8NHG7 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SVIPQ8NHG7 SPATA31C1-202ENST00000602681 1927 ntTSL 2 BASIC10.68□□□□□ -0.7
SVIPQ8NHG7 SLC37A2-201ENST00000308074 2696 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
SVIPQ8NHG7 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC10.68□□□□□ -0.7
SVIPQ8NHG7 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC10.68□□□□□ -0.7
SVIPQ8NHG7 AC008895.1-201ENST00000624074 2622 ntBASIC10.68□□□□□ -0.7
SVIPQ8NHG7 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
SVIPQ8NHG7 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SVIPQ8NHG7 CYB5R3-202ENST00000361740 2938 ntTSL 2 BASIC10.68□□□□□ -0.7
SVIPQ8NHG7 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SVIPQ8NHG7 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
SVIPQ8NHG7 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SVIPQ8NHG7 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
SVIPQ8NHG7 FAM157C-204ENST00000570230 2184 ntTSL 5 BASIC10.67□□□□□ -0.7
SVIPQ8NHG7 MCM3-202ENST00000419835 2523 ntTSL 2 BASIC10.67□□□□□ -0.7
SVIPQ8NHG7 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SVIPQ8NHG7 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SVIPQ8NHG7 CDRT4-204ENST00000619038 2498 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
SVIPQ8NHG7 MTMR11-202ENST00000439741 2827 ntAPPRIS P4 TSL 2 BASIC10.67□□□□□ -0.7
SVIPQ8NHG7 CAPN8-201ENST00000366872 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SVIPQ8NHG7 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SVIPQ8NHG7 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SVIPQ8NHG7 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC10.67□□□□□ -0.7
SVIPQ8NHG7 SMIM10L1-201ENST00000622602 4795 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
SVIPQ8NHG7 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SVIPQ8NHG7 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SVIPQ8NHG7 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SVIPQ8NHG7 G2E3-202ENST00000438909 2334 ntTSL 2 BASIC10.67□□□□□ -0.7
SVIPQ8NHG7 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC10.67□□□□□ -0.7
SVIPQ8NHG7 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
SVIPQ8NHG7 OR2T27-201ENST00000344889 954 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
SVIPQ8NHG7 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC10.67□□□□□ -0.7
SVIPQ8NHG7 EHF-202ENST00000450654 2519 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SVIPQ8NHG7 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC10.67□□□□□ -0.7
SVIPQ8NHG7 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
SVIPQ8NHG7 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC10.67□□□□□ -0.7
SVIPQ8NHG7 ACOT11-201ENST00000343744 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
SVIPQ8NHG7 POPDC2-208ENST00000493094 1837 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
SVIPQ8NHG7 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
SVIPQ8NHG7 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SVIPQ8NHG7 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SVIPQ8NHG7 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
SVIPQ8NHG7 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SVIPQ8NHG7 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC10.67□□□□□ -0.7
SVIPQ8NHG7 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SVIPQ8NHG7 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
SVIPQ8NHG7 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
SVIPQ8NHG7 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SVIPQ8NHG7 TRPV1-201ENST00000310522 2340 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SVIPQ8NHG7 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SVIPQ8NHG7 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC10.67□□□□□ -0.7
SVIPQ8NHG7 SESN2-201ENST00000253063 3453 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SVIPQ8NHG7 MAML3-203ENST00000509479 6844 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SVIPQ8NHG7 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SVIPQ8NHG7 COLQ-203ENST00000383788 3005 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
SVIPQ8NHG7 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SVIPQ8NHG7 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SVIPQ8NHG7 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
SVIPQ8NHG7 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC10.66□□□□□ -0.7
SVIPQ8NHG7 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
SVIPQ8NHG7 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
SVIPQ8NHG7 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SVIPQ8NHG7 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SVIPQ8NHG7 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC10.66□□□□□ -0.7
SVIPQ8NHG7 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SVIPQ8NHG7 IFNLR1-201ENST00000327535 4549 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
SVIPQ8NHG7 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SVIPQ8NHG7 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SVIPQ8NHG7 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
SVIPQ8NHG7 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SVIPQ8NHG7 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SVIPQ8NHG7 C3orf20-203ENST00000435614 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
SVIPQ8NHG7 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SVIPQ8NHG7 GLP1R-201ENST00000373256 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SVIPQ8NHG7 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SVIPQ8NHG7 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SVIPQ8NHG7 AL365203.3-201ENST00000609742 2057 ntBASIC10.66□□□□□ -0.7
SVIPQ8NHG7 FGF11-203ENST00000575082 2315 ntTSL 2 BASIC10.66□□□□□ -0.7
SVIPQ8NHG7 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC10.66□□□□□ -0.7
SVIPQ8NHG7 BLK-205ENST00000529894 2017 ntTSL 5 BASIC10.66□□□□□ -0.7
SVIPQ8NHG7 LINC00638-201ENST00000555578 2518 ntBASIC10.66□□□□□ -0.7
SVIPQ8NHG7 GRIA1-208ENST00000518142 2761 ntTSL 2 BASIC10.66□□□□□ -0.7
SVIPQ8NHG7 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SVIPQ8NHG7 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC10.66□□□□□ -0.7
SVIPQ8NHG7 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC10.66□□□□□ -0.7
SVIPQ8NHG7 POLL-217ENST00000628479 1953 ntTSL 5 BASIC10.66□□□□□ -0.7
SVIPQ8NHG7 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
SVIPQ8NHG7 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
SVIPQ8NHG7 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
SVIPQ8NHG7 TSPAN2-202ENST00000369516 3177 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SVIPQ8NHG7 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC10.66□□□□□ -0.7
SVIPQ8NHG7 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC10.66□□□□□ -0.7
SVIPQ8NHG7 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SVIPQ8NHG7 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms