RNA–Protein interactions for RNA: ENST00000518142.5

GRIA1-208, Transcript of glutamate ionotropic receptor AMPA type subunit 1, humanhuman

TSL 2 BASIC

Gene GRIA1, Length 2,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1-208ENST00000518142 PELP1Q8IZL8 1130 aaKnown RBP17.58■□□□□ 0.4
GRIA1-208ENST00000518142 MYT1Q01538 1121 aa17.49■□□□□ 0.39
GRIA1-208ENST00000518142 SLC24A1O60721 1099 aa17.11■□□□□ 0.33
GRIA1-208ENST00000518142 TTBK1Q5TCY1 1321 aaPredicted RBP17.04■□□□□ 0.32
GRIA1-208ENST00000518142 NISCHQ9Y2I1 1504 aa16.99■□□□□ 0.31
GRIA1-208ENST00000518142 PRKCSHP14314 528 aaPredicted RBP16.79■□□□□ 0.28
GRIA1-208ENST00000518142 HRCP23327 699 aa16.64■□□□□ 0.25
GRIA1-208ENST00000518142 APLP2Q06481 763 aa16.5■□□□□ 0.23
GRIA1-208ENST00000518142 PPARGC1BQ86YN6 1023 aaKnown RBP16.47■□□□□ 0.23
GRIA1-208ENST00000518142 ERICH6Q7L0X2 663 aa16.43■□□□□ 0.22
GRIA1-208ENST00000518142 PCGF6Q9BYE7 350 aa16.28■□□□□ 0.2
GRIA1-208ENST00000518142 DAXXQ9UER7 740 aaPredicted RBP16.15■□□□□ 0.18
GRIA1-208ENST00000518142 SCAF1Q9H7N4 1312 aaKnown RBP16.03■□□□□ 0.16
GRIA1-208ENST00000518142 SUPT5HO00267 1087 aaKnown RBP15.93■□□□□ 0.14
GRIA1-208ENST00000518142 BCL11AQ9H165 835 aa15.92■□□□□ 0.14
GRIA1-208ENST00000518142 SHROOM4Q9ULL8 1493 aa15.82■□□□□ 0.12
GRIA1-208ENST00000518142 MYO15BQ96JP2 1530 aa15.77■□□□□ 0.11
GRIA1-208ENST00000518142 FAM9AQ8IZU1 332 aaPredicted RBP15.68■□□□□ 0.1
GRIA1-208ENST00000518142 CHIC1Q5VXU3 224 aa15.6■□□□□ 0.09
GRIA1-208ENST00000518142 EIF5BO60841 1220 aaKnown RBP15.52■□□□□ 0.08
GRIA1-208ENST00000518142 TRIM26Q12899 539 aaPredicted RBP15.49■□□□□ 0.07
GRIA1-208ENST00000518142 NEUROD1Q13562 356 aa15.47■□□□□ 0.07
GRIA1-208ENST00000518142 ACIN1Q9UKV3 1341 aaKnown RBP15.47■□□□□ 0.07
GRIA1-208ENST00000518142 GTF3C3Q9Y5Q9 886 aa15.47■□□□□ 0.07
GRIA1-208ENST00000518142 ZEB1P37275 1124 aaPredicted RBP15.44■□□□□ 0.06
GRIA1-208ENST00000518142 LOC105371045A0A1W2PR82 267 aa15.44■□□□□ 0.06
GRIA1-208ENST00000518142 DCAF1Q9Y4B6 1507 aa15.38■□□□□ 0.05
GRIA1-208ENST00000518142 CENPBP07199 599 aaPredicted RBP15.26■□□□□ 0.03
GRIA1-208ENST00000518142 CCDC180Q9P1Z9 1646 aa15.24■□□□□ 0.03
GRIA1-208ENST00000518142 PLEKHG5O94827 1062 aa15.18■□□□□ 0.02
GRIA1-208ENST00000518142 NCBP3Q53F19 620 aaKnown RBP15.13■□□□□ 0.01
GRIA1-208ENST00000518142 DIEXFQ68CQ4 756 aaKnown RBP15.06■□□□□ 0
GRIA1-208ENST00000518142 YTHDC1Q96MU7 727 aaKnown RBP15.06■□□□□ 0
GRIA1-208ENST00000518142 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.96□□□□□ -0.02
GRIA1-208ENST00000518142 CCER1Q8TC90 406 aaPredicted RBP14.93□□□□□ -0.02
GRIA1-208ENST00000518142 EHMT2Q96KQ7 1210 aa14.92□□□□□ -0.02
GRIA1-208ENST00000518142 UBE2Q2Q8WVN8 375 aa14.9□□□□□ -0.02
GRIA1-208ENST00000518142 PODXL2Q9NZ53 605 aa14.85□□□□□ -0.03
GRIA1-208ENST00000518142 ARXQ96QS3 562 aa14.8□□□□□ -0.04
GRIA1-208ENST00000518142 ANP32EQ9BTT0 268 aa14.8□□□□□ -0.04
GRIA1-208ENST00000518142 PLPPR3Q6T4P5 718 aa14.76□□□□□ -0.05
GRIA1-208ENST00000518142 KLHL34Q8N239 644 aa14.74□□□□□ -0.05
GRIA1-208ENST00000518142 CSRNP3Q8WYN3 585 aa14.72□□□□□ -0.05
GRIA1-208ENST00000518142 RTN4Q9NQC3 1192 aaKnown RBP14.7□□□□□ -0.06
GRIA1-208ENST00000518142 RANGAP1P46060 587 aaPredicted RBP14.69□□□□□ -0.06
GRIA1-208ENST00000518142 DCAF8L2P0C7V8 631 aa14.68□□□□□ -0.06
GRIA1-208ENST00000518142 ANO8Q9HCE9 1232 aaPredicted RBP14.67□□□□□ -0.06
GRIA1-208ENST00000518142 TRIM41Q8WV44 630 aa14.65□□□□□ -0.06
GRIA1-208ENST00000518142 MIER1Q8N108 512 aa14.64□□□□□ -0.07
GRIA1-208ENST00000518142 TIMELESSQ9UNS1 1208 aa14.62□□□□□ -0.07
GRIA1-208ENST00000518142 ZNF316A6NFI3 1004 aaPredicted RBP14.62□□□□□ -0.07
GRIA1-208ENST00000518142 PKNOX2Q96KN3 472 aa14.59□□□□□ -0.07
GRIA1-208ENST00000518142 TSHZ2Q9NRE2 1034 aa14.59□□□□□ -0.07
GRIA1-208ENST00000518142 SUPT16HQ9Y5B9 1047 aaKnown RBP14.56□□□□□ -0.08
GRIA1-208ENST00000518142 ZCCHC6Q5VYS8 1495 aaKnown RBP14.49□□□□□ -0.09
GRIA1-208ENST00000518142 PDIA4P13667 645 aaKnown RBP14.4□□□□□ -0.1
GRIA1-208ENST00000518142 BCANQ96GW7 911 aa14.4□□□□□ -0.1
GRIA1-208ENST00000518142 AEBP2Q6ZN18 517 aaPredicted RBP14.34□□□□□ -0.11
GRIA1-208ENST00000518142 CLSPNQ9HAW4 1339 aa14.31□□□□□ -0.12
GRIA1-208ENST00000518142 PDE4CQ08493 712 aa14.3□□□□□ -0.12
GRIA1-208ENST00000518142 NEFLP07196 543 aa14.3□□□□□ -0.12
GRIA1-208ENST00000518142 TULP1O00294 542 aaPredicted RBP14.29□□□□□ -0.12
GRIA1-208ENST00000518142 HOMEZQ8IX15 550 aa14.27□□□□□ -0.13
GRIA1-208ENST00000518142 SALL2Q9Y467 1007 aaPredicted RBP14.23□□□□□ -0.13
GRIA1-208ENST00000518142 RBM19Q9Y4C8 960 aaKnown RBP14.23□□□□□ -0.13
GRIA1-208ENST00000518142 FKBP8Q14318 412 aa14.17□□□□□ -0.14
GRIA1-208ENST00000518142 CCDC136Q96JN2 1154 aa14.17□□□□□ -0.14
GRIA1-208ENST00000518142 HNRNPUL2Q1KMD3 747 aaKnown RBP14.16□□□□□ -0.14
GRIA1-208ENST00000518142 ITGAEP38570 1179 aa14.14□□□□□ -0.15
GRIA1-208ENST00000518142 MSH5O43196 834 aa14.13□□□□□ -0.15
GRIA1-208ENST00000518142 ERICH6BQ5W0A0 696 aa14.09□□□□□ -0.15
GRIA1-208ENST00000518142 FGD1P98174 961 aa14.09□□□□□ -0.15
GRIA1-208ENST00000518142 BCL11BQ9C0K0 894 aaPredicted RBP14.06□□□□□ -0.16
GRIA1-208ENST00000518142 AMER1Q5JTC6 1135 aaPredicted RBP14.05□□□□□ -0.16
GRIA1-208ENST00000518142 KCNH8Q96L42 1107 aa14.05□□□□□ -0.16
GRIA1-208ENST00000518142 DEKP35659 375 aaKnown RBP14.04□□□□□ -0.16
GRIA1-208ENST00000518142 TAF7LQ5H9L4 462 aa14.02□□□□□ -0.17
GRIA1-208ENST00000518142 NPM2Q86SE8 214 aaKnown RBP13.97□□□□□ -0.17
GRIA1-208ENST00000518142 RB1CC1Q8TDY2 1594 aa13.94□□□□□ -0.18
GRIA1-208ENST00000518142 RSF1Q96T23 1441 aaPredicted RBP13.92□□□□□ -0.18
GRIA1-208ENST00000518142 NBR1Q14596 966 aa13.91□□□□□ -0.18
GRIA1-208ENST00000518142 CHMP4AQ9BY43 222 aa13.9□□□□□ -0.18
GRIA1-208ENST00000518142 CEP162Q5TB80 1403 aa13.89□□□□□ -0.19
GRIA1-208ENST00000518142 ABCC9O60706 1549 aa13.89□□□□□ -0.19
GRIA1-208ENST00000518142 TAOK2Q9UL54 1235 aa13.88□□□□□ -0.19
GRIA1-208ENST00000518142 AAMPQ13685 434 aa13.88□□□□□ -0.19
GRIA1-208ENST00000518142 A0A0U1RQG5 324 aaPredicted RBP13.88□□□□□ -0.19
GRIA1-208ENST00000518142 WRNQ14191 1432 aaPredicted RBP eCLIP13.87□□□□□ -0.19
GRIA1-208ENST00000518142 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.87□□□□□ -0.19
GRIA1-208ENST00000518142 TRIM52Q96A61 297 aa13.86□□□□□ -0.19
GRIA1-208ENST00000518142 MYT1LQ9UL68 1186 aa13.86□□□□□ -0.19
GRIA1-208ENST00000518142 FANCIQ9NVI1 1328 aa13.86□□□□□ -0.19
GRIA1-208ENST00000518142 UBTFP17480 764 aaKnown RBP13.86□□□□□ -0.19
GRIA1-208ENST00000518142 DHX37Q8IY37 1157 aaKnown RBP13.85□□□□□ -0.19
GRIA1-208ENST00000518142 CDK11AQ9UQ88 783 aaPredicted RBP13.84□□□□□ -0.19
GRIA1-208ENST00000518142 IRX6P78412 446 aaPredicted RBP13.82□□□□□ -0.2
GRIA1-208ENST00000518142 C14orf37Q86TY3 774 aa13.82□□□□□ -0.2
GRIA1-208ENST00000518142 BRD2P25440 801 aaKnown RBP13.81□□□□□ -0.2
GRIA1-208ENST00000518142 HAP1P54257 671 aaPredicted RBP13.78□□□□□ -0.2
GRIA1-208ENST00000518142 SAMD1Q6SPF0 538 aaPredicted RBP13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms