Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHMP1BQ7LBR1 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHMP1BQ7LBR1 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHMP1BQ7LBR1 AC134043.2-201ENST00000624206 2238 ntBASIC15.97■□□□□ 0.15
CHMP1BQ7LBR1 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHMP1BQ7LBR1 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.97■□□□□ 0.15
CHMP1BQ7LBR1 AC026396.1-201ENST00000419388 421 ntBASIC15.97■□□□□ 0.15
CHMP1BQ7LBR1 SAPCD2P3-201ENST00000455031 850 ntBASIC15.97■□□□□ 0.15
CHMP1BQ7LBR1 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.97■□□□□ 0.15
CHMP1BQ7LBR1 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.97■□□□□ 0.15
CHMP1BQ7LBR1 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.97■□□□□ 0.15
CHMP1BQ7LBR1 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.97■□□□□ 0.15
CHMP1BQ7LBR1 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CHMP1BQ7LBR1 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC15.97■□□□□ 0.15
CHMP1BQ7LBR1 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CHMP1BQ7LBR1 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHMP1BQ7LBR1 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHMP1BQ7LBR1 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHMP1BQ7LBR1 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHMP1BQ7LBR1 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHMP1BQ7LBR1 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.97■□□□□ 0.15
CHMP1BQ7LBR1 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHMP1BQ7LBR1 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHMP1BQ7LBR1 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHMP1BQ7LBR1 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CHMP1BQ7LBR1 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHMP1BQ7LBR1 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CHMP1BQ7LBR1 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHMP1BQ7LBR1 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CHMP1BQ7LBR1 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHMP1BQ7LBR1 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHMP1BQ7LBR1 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHMP1BQ7LBR1 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CHMP1BQ7LBR1 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHMP1BQ7LBR1 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHMP1BQ7LBR1 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHMP1BQ7LBR1 AL391005.1-201ENST00000623953 2435 ntBASIC15.96■□□□□ 0.15
CHMP1BQ7LBR1 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.96■□□□□ 0.15
CHMP1BQ7LBR1 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CHMP1BQ7LBR1 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHMP1BQ7LBR1 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHMP1BQ7LBR1 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHMP1BQ7LBR1 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHMP1BQ7LBR1 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHMP1BQ7LBR1 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHMP1BQ7LBR1 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHMP1BQ7LBR1 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.96■□□□□ 0.15
CHMP1BQ7LBR1 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHMP1BQ7LBR1 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.96■□□□□ 0.15
CHMP1BQ7LBR1 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.96■□□□□ 0.15
CHMP1BQ7LBR1 AC132008.2-207ENST00000454517 770 ntBASIC15.96■□□□□ 0.15
CHMP1BQ7LBR1 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.96■□□□□ 0.15
CHMP1BQ7LBR1 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.96■□□□□ 0.15
CHMP1BQ7LBR1 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.96■□□□□ 0.15
CHMP1BQ7LBR1 AC011467.2-201ENST00000598425 242 ntBASIC15.96■□□□□ 0.15
CHMP1BQ7LBR1 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.96■□□□□ 0.15
CHMP1BQ7LBR1 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.96■□□□□ 0.15
CHMP1BQ7LBR1 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.96■□□□□ 0.15
CHMP1BQ7LBR1 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.96■□□□□ 0.15
CHMP1BQ7LBR1 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
CHMP1BQ7LBR1 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHMP1BQ7LBR1 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
CHMP1BQ7LBR1 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHMP1BQ7LBR1 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.96■□□□□ 0.15
CHMP1BQ7LBR1 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.96■□□□□ 0.15
CHMP1BQ7LBR1 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CHMP1BQ7LBR1 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CHMP1BQ7LBR1 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.96■□□□□ 0.15
CHMP1BQ7LBR1 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CHMP1BQ7LBR1 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CHMP1BQ7LBR1 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.96■□□□□ 0.15
CHMP1BQ7LBR1 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
CHMP1BQ7LBR1 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
CHMP1BQ7LBR1 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
CHMP1BQ7LBR1 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
CHMP1BQ7LBR1 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.95■□□□□ 0.14
CHMP1BQ7LBR1 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CHMP1BQ7LBR1 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CHMP1BQ7LBR1 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.95■□□□□ 0.14
CHMP1BQ7LBR1 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.95■□□□□ 0.14
CHMP1BQ7LBR1 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHMP1BQ7LBR1 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CHMP1BQ7LBR1 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CHMP1BQ7LBR1 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHMP1BQ7LBR1 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CHMP1BQ7LBR1 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHMP1BQ7LBR1 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.95■□□□□ 0.14
CHMP1BQ7LBR1 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHMP1BQ7LBR1 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CHMP1BQ7LBR1 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHMP1BQ7LBR1 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.95■□□□□ 0.14
CHMP1BQ7LBR1 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.95■□□□□ 0.14
CHMP1BQ7LBR1 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.95■□□□□ 0.14
CHMP1BQ7LBR1 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.95■□□□□ 0.14
CHMP1BQ7LBR1 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.95■□□□□ 0.14
CHMP1BQ7LBR1 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
CHMP1BQ7LBR1 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.95■□□□□ 0.14
CHMP1BQ7LBR1 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.95■□□□□ 0.14
CHMP1BQ7LBR1 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.95■□□□□ 0.14
CHMP1BQ7LBR1 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms