Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NHLRC1Q6VVB1 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
NHLRC1Q6VVB1 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NHLRC1Q6VVB1 AC003669.1-201ENST00000334569 611 ntBASIC15.52■□□□□ 0.08
NHLRC1Q6VVB1 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NHLRC1Q6VVB1 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NHLRC1Q6VVB1 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.52■□□□□ 0.08
NHLRC1Q6VVB1 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.52■□□□□ 0.08
NHLRC1Q6VVB1 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NHLRC1Q6VVB1 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.52■□□□□ 0.08
NHLRC1Q6VVB1 AL591684.3-201ENST00000605187 298 ntBASIC15.52■□□□□ 0.08
NHLRC1Q6VVB1 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.52■□□□□ 0.08
NHLRC1Q6VVB1 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.52■□□□□ 0.08
NHLRC1Q6VVB1 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NHLRC1Q6VVB1 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.52■□□□□ 0.08
NHLRC1Q6VVB1 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NHLRC1Q6VVB1 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NHLRC1Q6VVB1 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.52■□□□□ 0.07
NHLRC1Q6VVB1 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.52■□□□□ 0.07
NHLRC1Q6VVB1 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NHLRC1Q6VVB1 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.52■□□□□ 0.07
NHLRC1Q6VVB1 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
NHLRC1Q6VVB1 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NHLRC1Q6VVB1 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
NHLRC1Q6VVB1 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.52■□□□□ 0.07
NHLRC1Q6VVB1 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NHLRC1Q6VVB1 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.51■□□□□ 0.07
NHLRC1Q6VVB1 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NHLRC1Q6VVB1 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NHLRC1Q6VVB1 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NHLRC1Q6VVB1 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.51■□□□□ 0.07
NHLRC1Q6VVB1 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NHLRC1Q6VVB1 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NHLRC1Q6VVB1 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NHLRC1Q6VVB1 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.51■□□□□ 0.07
NHLRC1Q6VVB1 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.51■□□□□ 0.07
NHLRC1Q6VVB1 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
NHLRC1Q6VVB1 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
NHLRC1Q6VVB1 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NHLRC1Q6VVB1 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
NHLRC1Q6VVB1 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NHLRC1Q6VVB1 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NHLRC1Q6VVB1 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NHLRC1Q6VVB1 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NHLRC1Q6VVB1 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NHLRC1Q6VVB1 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NHLRC1Q6VVB1 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
NHLRC1Q6VVB1 TSPY19P-201ENST00000418461 509 ntBASIC15.51■□□□□ 0.07
NHLRC1Q6VVB1 TSPY18P-201ENST00000441642 509 ntBASIC15.51■□□□□ 0.07
NHLRC1Q6VVB1 HCG4P8-203ENST00000443049 980 ntBASIC15.51■□□□□ 0.07
NHLRC1Q6VVB1 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NHLRC1Q6VVB1 AC132008.2-207ENST00000454517 770 ntBASIC15.51■□□□□ 0.07
NHLRC1Q6VVB1 FOSL1P1-201ENST00000511041 816 ntBASIC15.51■□□□□ 0.07
NHLRC1Q6VVB1 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC15.51■□□□□ 0.07
NHLRC1Q6VVB1 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NHLRC1Q6VVB1 MIR3652-201ENST00000579335 131 ntBASIC15.51■□□□□ 0.07
NHLRC1Q6VVB1 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NHLRC1Q6VVB1 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NHLRC1Q6VVB1 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NHLRC1Q6VVB1 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NHLRC1Q6VVB1 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.51■□□□□ 0.07
NHLRC1Q6VVB1 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NHLRC1Q6VVB1 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NHLRC1Q6VVB1 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
NHLRC1Q6VVB1 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NHLRC1Q6VVB1 AP005117.1-201ENST00000584346 1413 ntBASIC15.51■□□□□ 0.07
NHLRC1Q6VVB1 SIGLEC16-201ENST00000599858 1437 ntBASIC15.51■□□□□ 0.07
NHLRC1Q6VVB1 AL135999.2-201ENST00000622438 1686 ntBASIC15.51■□□□□ 0.07
NHLRC1Q6VVB1 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NHLRC1Q6VVB1 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NHLRC1Q6VVB1 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NHLRC1Q6VVB1 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
NHLRC1Q6VVB1 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NHLRC1Q6VVB1 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NHLRC1Q6VVB1 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NHLRC1Q6VVB1 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
NHLRC1Q6VVB1 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NHLRC1Q6VVB1 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
NHLRC1Q6VVB1 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NHLRC1Q6VVB1 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.5■□□□□ 0.07
NHLRC1Q6VVB1 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NHLRC1Q6VVB1 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.5■□□□□ 0.07
NHLRC1Q6VVB1 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NHLRC1Q6VVB1 SPDYE21P-201ENST00000413323 827 ntBASIC15.5■□□□□ 0.07
NHLRC1Q6VVB1 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.5■□□□□ 0.07
NHLRC1Q6VVB1 STK19B-204ENST00000512515 211 ntBASIC15.5■□□□□ 0.07
NHLRC1Q6VVB1 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.5■□□□□ 0.07
NHLRC1Q6VVB1 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NHLRC1Q6VVB1 AP001269.4-201ENST00000609611 512 ntBASIC15.5■□□□□ 0.07
NHLRC1Q6VVB1 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.5■□□□□ 0.07
NHLRC1Q6VVB1 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NHLRC1Q6VVB1 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.5■□□□□ 0.07
NHLRC1Q6VVB1 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
NHLRC1Q6VVB1 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NHLRC1Q6VVB1 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NHLRC1Q6VVB1 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NHLRC1Q6VVB1 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NHLRC1Q6VVB1 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.5■□□□□ 0.07
NHLRC1Q6VVB1 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.5■□□□□ 0.07
NHLRC1Q6VVB1 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms