Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SHC4Q6S5L8 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SHC4Q6S5L8 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SHC4Q6S5L8 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SHC4Q6S5L8 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SHC4Q6S5L8 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
SHC4Q6S5L8 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHC4Q6S5L8 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHC4Q6S5L8 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHC4Q6S5L8 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHC4Q6S5L8 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SHC4Q6S5L8 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHC4Q6S5L8 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
SHC4Q6S5L8 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.43■□□□□ 0.7
SHC4Q6S5L8 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHC4Q6S5L8 NUS1P2-201ENST00000417358 873 ntBASIC19.43■□□□□ 0.7
SHC4Q6S5L8 ACTG1P4-201ENST00000425123 1122 ntBASIC19.43■□□□□ 0.7
SHC4Q6S5L8 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SHC4Q6S5L8 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.43■□□□□ 0.7
SHC4Q6S5L8 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHC4Q6S5L8 DUX4L17-201ENST00000557360 1267 ntBASIC19.43■□□□□ 0.7
SHC4Q6S5L8 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.43■□□□□ 0.7
SHC4Q6S5L8 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
SHC4Q6S5L8 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
SHC4Q6S5L8 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.43■□□□□ 0.7
SHC4Q6S5L8 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SHC4Q6S5L8 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SHC4Q6S5L8 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.43■□□□□ 0.7
SHC4Q6S5L8 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SHC4Q6S5L8 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHC4Q6S5L8 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHC4Q6S5L8 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHC4Q6S5L8 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
SHC4Q6S5L8 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHC4Q6S5L8 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHC4Q6S5L8 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHC4Q6S5L8 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SHC4Q6S5L8 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHC4Q6S5L8 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHC4Q6S5L8 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
SHC4Q6S5L8 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC19.42■□□□□ 0.7
SHC4Q6S5L8 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHC4Q6S5L8 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.42■□□□□ 0.7
SHC4Q6S5L8 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SHC4Q6S5L8 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHC4Q6S5L8 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHC4Q6S5L8 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC19.42■□□□□ 0.7
SHC4Q6S5L8 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SHC4Q6S5L8 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHC4Q6S5L8 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
SHC4Q6S5L8 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHC4Q6S5L8 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.42■□□□□ 0.7
SHC4Q6S5L8 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHC4Q6S5L8 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.42■□□□□ 0.7
SHC4Q6S5L8 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.42■□□□□ 0.7
SHC4Q6S5L8 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHC4Q6S5L8 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SHC4Q6S5L8 AC091076.1-201ENST00000610741 619 ntBASIC19.42■□□□□ 0.7
SHC4Q6S5L8 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SHC4Q6S5L8 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SHC4Q6S5L8 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
SHC4Q6S5L8 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHC4Q6S5L8 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHC4Q6S5L8 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SHC4Q6S5L8 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SHC4Q6S5L8 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.42■□□□□ 0.7
SHC4Q6S5L8 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SHC4Q6S5L8 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
SHC4Q6S5L8 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC19.41■□□□□ 0.7
SHC4Q6S5L8 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SHC4Q6S5L8 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SHC4Q6S5L8 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.41■□□□□ 0.7
SHC4Q6S5L8 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC19.41■□□□□ 0.7
SHC4Q6S5L8 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19.41■□□□□ 0.7
SHC4Q6S5L8 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SHC4Q6S5L8 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SHC4Q6S5L8 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.41■□□□□ 0.7
SHC4Q6S5L8 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SHC4Q6S5L8 AC097637.2-201ENST00000624096 1997 ntBASIC19.41■□□□□ 0.7
SHC4Q6S5L8 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
SHC4Q6S5L8 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SHC4Q6S5L8 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SHC4Q6S5L8 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SHC4Q6S5L8 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC19.41■□□□□ 0.7
SHC4Q6S5L8 AC079776.2-201ENST00000641154 1609 ntBASIC19.41■□□□□ 0.7
SHC4Q6S5L8 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.41■□□□□ 0.7
SHC4Q6S5L8 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SHC4Q6S5L8 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SHC4Q6S5L8 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SHC4Q6S5L8 AL645728.1-201ENST00000366221 2101 ntBASIC19.41■□□□□ 0.7
SHC4Q6S5L8 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SHC4Q6S5L8 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
SHC4Q6S5L8 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.41■□□□□ 0.7
SHC4Q6S5L8 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.41■□□□□ 0.7
SHC4Q6S5L8 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.41■□□□□ 0.7
SHC4Q6S5L8 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.41■□□□□ 0.7
SHC4Q6S5L8 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.41■□□□□ 0.7
SHC4Q6S5L8 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SHC4Q6S5L8 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.41■□□□□ 0.7
SHC4Q6S5L8 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms