Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 YBX2P1-201ENST00000394192 760 ntBASIC16.45■□□□□ 0.22
PRAMEF17Q5VTA0 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
PRAMEF17Q5VTA0 CRYGEP-201ENST00000412192 528 ntBASIC16.45■□□□□ 0.22
PRAMEF17Q5VTA0 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF17Q5VTA0 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.45■□□□□ 0.22
PRAMEF17Q5VTA0 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.45■□□□□ 0.22
PRAMEF17Q5VTA0 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.45■□□□□ 0.22
PRAMEF17Q5VTA0 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.45■□□□□ 0.22
PRAMEF17Q5VTA0 AL139327.4-201ENST00000612362 153 ntBASIC16.45■□□□□ 0.22
PRAMEF17Q5VTA0 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
PRAMEF17Q5VTA0 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.45■□□□□ 0.22
PRAMEF17Q5VTA0 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
PRAMEF17Q5VTA0 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.45■□□□□ 0.22
PRAMEF17Q5VTA0 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF17Q5VTA0 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF17Q5VTA0 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.45■□□□□ 0.22
PRAMEF17Q5VTA0 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PRAMEF17Q5VTA0 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
PRAMEF17Q5VTA0 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF17Q5VTA0 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF17Q5VTA0 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
PRAMEF17Q5VTA0 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF17Q5VTA0 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF17Q5VTA0 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PRAMEF17Q5VTA0 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PRAMEF17Q5VTA0 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF17Q5VTA0 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.44■□□□□ 0.22
PRAMEF17Q5VTA0 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF17Q5VTA0 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
PRAMEF17Q5VTA0 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
PRAMEF17Q5VTA0 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF17Q5VTA0 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF17Q5VTA0 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF17Q5VTA0 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.44■□□□□ 0.22
PRAMEF17Q5VTA0 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF17Q5VTA0 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.44■□□□□ 0.22
PRAMEF17Q5VTA0 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF17Q5VTA0 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF17Q5VTA0 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.44■□□□□ 0.22
PRAMEF17Q5VTA0 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.44■□□□□ 0.22
PRAMEF17Q5VTA0 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF17Q5VTA0 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.44■□□□□ 0.22
PRAMEF17Q5VTA0 VN2R19P-201ENST00000442399 1052 ntBASIC16.44■□□□□ 0.22
PRAMEF17Q5VTA0 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.44■□□□□ 0.22
PRAMEF17Q5VTA0 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
PRAMEF17Q5VTA0 AC040169.1-201ENST00000565382 521 ntBASIC16.44■□□□□ 0.22
PRAMEF17Q5VTA0 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PRAMEF17Q5VTA0 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
PRAMEF17Q5VTA0 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.44■□□□□ 0.22
PRAMEF17Q5VTA0 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PRAMEF17Q5VTA0 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.44■□□□□ 0.22
PRAMEF17Q5VTA0 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF17Q5VTA0 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
PRAMEF17Q5VTA0 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.44■□□□□ 0.22
PRAMEF17Q5VTA0 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PRAMEF17Q5VTA0 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF17Q5VTA0 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.44■□□□□ 0.22
PRAMEF17Q5VTA0 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF17Q5VTA0 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF17Q5VTA0 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.44■□□□□ 0.22
PRAMEF17Q5VTA0 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.43■□□□□ 0.22
PRAMEF17Q5VTA0 LYSMD4-203ENST00000378904 2122 ntBASIC16.43■□□□□ 0.22
PRAMEF17Q5VTA0 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRAMEF17Q5VTA0 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRAMEF17Q5VTA0 GPR89P-201ENST00000407924 1495 ntBASIC16.43■□□□□ 0.22
PRAMEF17Q5VTA0 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PRAMEF17Q5VTA0 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRAMEF17Q5VTA0 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
PRAMEF17Q5VTA0 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRAMEF17Q5VTA0 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.43■□□□□ 0.22
PRAMEF17Q5VTA0 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.43■□□□□ 0.22
PRAMEF17Q5VTA0 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRAMEF17Q5VTA0 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PRAMEF17Q5VTA0 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
PRAMEF17Q5VTA0 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
PRAMEF17Q5VTA0 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.43■□□□□ 0.22
PRAMEF17Q5VTA0 AL805961.1-202ENST00000641562 540 ntBASIC16.43■□□□□ 0.22
PRAMEF17Q5VTA0 AC092865.6-201ENST00000642101 219 ntBASIC16.43■□□□□ 0.22
PRAMEF17Q5VTA0 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PRAMEF17Q5VTA0 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRAMEF17Q5VTA0 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRAMEF17Q5VTA0 NOC2LP1-202ENST00000452600 2235 ntBASIC16.43■□□□□ 0.22
PRAMEF17Q5VTA0 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PRAMEF17Q5VTA0 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.43■□□□□ 0.22
PRAMEF17Q5VTA0 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PRAMEF17Q5VTA0 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRAMEF17Q5VTA0 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRAMEF17Q5VTA0 PCDHB18P-201ENST00000524813 2368 ntBASIC16.43■□□□□ 0.22
PRAMEF17Q5VTA0 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PRAMEF17Q5VTA0 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRAMEF17Q5VTA0 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.43■□□□□ 0.22
PRAMEF17Q5VTA0 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.43■□□□□ 0.22
PRAMEF17Q5VTA0 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PRAMEF17Q5VTA0 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PRAMEF17Q5VTA0 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRAMEF17Q5VTA0 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.43■□□□□ 0.22
PRAMEF17Q5VTA0 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRAMEF17Q5VTA0 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PRAMEF17Q5VTA0 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRAMEF17Q5VTA0 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms