Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC25.74■■□□□ 1.71
CDC42BPAQ5VT25 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
CDC42BPAQ5VT25 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
CDC42BPAQ5VT25 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC25.74■■□□□ 1.71
CDC42BPAQ5VT25 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC25.74■■□□□ 1.71
CDC42BPAQ5VT25 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC25.74■■□□□ 1.71
CDC42BPAQ5VT25 CDK2AP2P3-201ENST00000422476 372 ntBASIC25.74■■□□□ 1.71
CDC42BPAQ5VT25 SLC25A6P5-201ENST00000435663 894 ntBASIC25.74■■□□□ 1.71
CDC42BPAQ5VT25 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC25.74■■□□□ 1.71
CDC42BPAQ5VT25 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC25.74■■□□□ 1.71
CDC42BPAQ5VT25 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC25.74■■□□□ 1.71
CDC42BPAQ5VT25 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC25.74■■□□□ 1.71
CDC42BPAQ5VT25 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC25.74■■□□□ 1.71
CDC42BPAQ5VT25 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC25.74■■□□□ 1.71
CDC42BPAQ5VT25 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CDC42BPAQ5VT25 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
CDC42BPAQ5VT25 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC25.73■■□□□ 1.71
CDC42BPAQ5VT25 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC25.73■■□□□ 1.71
CDC42BPAQ5VT25 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
CDC42BPAQ5VT25 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC25.73■■□□□ 1.71
CDC42BPAQ5VT25 FRMD8P1-201ENST00000440433 1524 ntBASIC25.73■■□□□ 1.71
CDC42BPAQ5VT25 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
CDC42BPAQ5VT25 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CDC42BPAQ5VT25 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CDC42BPAQ5VT25 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CDC42BPAQ5VT25 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CDC42BPAQ5VT25 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC25.73■■□□□ 1.71
CDC42BPAQ5VT25 AC007274.1-201ENST00000439805 662 ntBASIC25.73■■□□□ 1.71
CDC42BPAQ5VT25 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
CDC42BPAQ5VT25 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
CDC42BPAQ5VT25 WT1-AS_2.1-201ENST00000613208 137 ntBASIC25.73■■□□□ 1.71
CDC42BPAQ5VT25 AL138828.2-201ENST00000615812 383 ntBASIC25.73■■□□□ 1.71
CDC42BPAQ5VT25 AC025048.6-201ENST00000634326 1161 ntBASIC25.73■■□□□ 1.71
CDC42BPAQ5VT25 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC25.73■■□□□ 1.71
CDC42BPAQ5VT25 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC25.73■■□□□ 1.71
CDC42BPAQ5VT25 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
CDC42BPAQ5VT25 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CDC42BPAQ5VT25 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC25.73■■□□□ 1.71
CDC42BPAQ5VT25 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
CDC42BPAQ5VT25 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC25.72■■□□□ 1.71
CDC42BPAQ5VT25 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CDC42BPAQ5VT25 FOS-208ENST00000555686 1496 ntTSL 2 BASIC25.72■■□□□ 1.71
CDC42BPAQ5VT25 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
CDC42BPAQ5VT25 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
CDC42BPAQ5VT25 GRAP-202ENST00000395635 834 ntTSL 2 BASIC25.72■■□□□ 1.71
CDC42BPAQ5VT25 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC25.72■■□□□ 1.71
CDC42BPAQ5VT25 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC25.72■■□□□ 1.71
CDC42BPAQ5VT25 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CDC42BPAQ5VT25 AL138918.1-201ENST00000568306 659 ntBASIC25.72■■□□□ 1.71
CDC42BPAQ5VT25 AL590560.3-201ENST00000623350 461 ntBASIC25.72■■□□□ 1.71
CDC42BPAQ5VT25 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CDC42BPAQ5VT25 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
CDC42BPAQ5VT25 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC25.72■■□□□ 1.71
CDC42BPAQ5VT25 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
CDC42BPAQ5VT25 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC25.72■■□□□ 1.71
CDC42BPAQ5VT25 AC022144.1-201ENST00000602255 1580 ntBASIC25.72■■□□□ 1.71
CDC42BPAQ5VT25 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
CDC42BPAQ5VT25 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
CDC42BPAQ5VT25 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
CDC42BPAQ5VT25 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC25.71■■□□□ 1.71
CDC42BPAQ5VT25 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC25.71■■□□□ 1.71
CDC42BPAQ5VT25 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CDC42BPAQ5VT25 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC25.71■■□□□ 1.71
CDC42BPAQ5VT25 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
CDC42BPAQ5VT25 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC25.71■■□□□ 1.71
CDC42BPAQ5VT25 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
CDC42BPAQ5VT25 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC25.71■■□□□ 1.71
CDC42BPAQ5VT25 AC004790.1-201ENST00000612686 536 ntBASIC25.71■■□□□ 1.71
CDC42BPAQ5VT25 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CDC42BPAQ5VT25 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
CDC42BPAQ5VT25 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC25.71■■□□□ 1.71
CDC42BPAQ5VT25 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC25.71■■□□□ 1.71
CDC42BPAQ5VT25 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC25.71■■□□□ 1.71
CDC42BPAQ5VT25 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
CDC42BPAQ5VT25 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CDC42BPAQ5VT25 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CDC42BPAQ5VT25 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC25.71■■□□□ 1.71
CDC42BPAQ5VT25 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CDC42BPAQ5VT25 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
CDC42BPAQ5VT25 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
CDC42BPAQ5VT25 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC25.71■■□□□ 1.71
CDC42BPAQ5VT25 RN7SL692P-201ENST00000464677 288 ntBASIC25.71■■□□□ 1.71
CDC42BPAQ5VT25 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CDC42BPAQ5VT25 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC25.71■■□□□ 1.71
CDC42BPAQ5VT25 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
CDC42BPAQ5VT25 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC25.7■■□□□ 1.71
CDC42BPAQ5VT25 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC25.7■■□□□ 1.71
CDC42BPAQ5VT25 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC25.7■■□□□ 1.71
CDC42BPAQ5VT25 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC25.7■■□□□ 1.71
CDC42BPAQ5VT25 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC25.7■■□□□ 1.71
CDC42BPAQ5VT25 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
CDC42BPAQ5VT25 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CDC42BPAQ5VT25 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
CDC42BPAQ5VT25 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
CDC42BPAQ5VT25 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC25.7■■□□□ 1.7
CDC42BPAQ5VT25 COX5BP8-201ENST00000416911 349 ntBASIC25.7■■□□□ 1.7
CDC42BPAQ5VT25 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC25.7■■□□□ 1.7
CDC42BPAQ5VT25 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC25.7■■□□□ 1.7
CDC42BPAQ5VT25 SIGLEC29P-201ENST00000599873 1114 ntBASIC25.7■■□□□ 1.7
CDC42BPAQ5VT25 AC004840.1-201ENST00000636359 365 ntBASIC25.7■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms