Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
ERCC6LQ2NKX8 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC18.3■□□□□ 0.52
ERCC6LQ2NKX8 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ERCC6LQ2NKX8 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC18.3■□□□□ 0.52
ERCC6LQ2NKX8 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
ERCC6LQ2NKX8 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.3■□□□□ 0.52
ERCC6LQ2NKX8 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.3■□□□□ 0.52
ERCC6LQ2NKX8 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ERCC6LQ2NKX8 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
ERCC6LQ2NKX8 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ERCC6LQ2NKX8 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ERCC6LQ2NKX8 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
ERCC6LQ2NKX8 MESTP1-201ENST00000404287 994 ntBASIC18.3■□□□□ 0.52
ERCC6LQ2NKX8 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.3■□□□□ 0.52
ERCC6LQ2NKX8 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ERCC6LQ2NKX8 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
ERCC6LQ2NKX8 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.3■□□□□ 0.52
ERCC6LQ2NKX8 AC124947.2-201ENST00000547118 1133 ntBASIC18.3■□□□□ 0.52
ERCC6LQ2NKX8 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ERCC6LQ2NKX8 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.3■□□□□ 0.52
ERCC6LQ2NKX8 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ERCC6LQ2NKX8 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ERCC6LQ2NKX8 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
ERCC6LQ2NKX8 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
ERCC6LQ2NKX8 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ERCC6LQ2NKX8 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
ERCC6LQ2NKX8 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC18.3■□□□□ 0.52
ERCC6LQ2NKX8 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
ERCC6LQ2NKX8 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.3■□□□□ 0.52
ERCC6LQ2NKX8 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ERCC6LQ2NKX8 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.3■□□□□ 0.52
ERCC6LQ2NKX8 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
ERCC6LQ2NKX8 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.29■□□□□ 0.52
ERCC6LQ2NKX8 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ERCC6LQ2NKX8 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.29■□□□□ 0.52
ERCC6LQ2NKX8 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ERCC6LQ2NKX8 BX276092.7-203ENST00000637198 1536 ntBASIC18.29■□□□□ 0.52
ERCC6LQ2NKX8 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ERCC6LQ2NKX8 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
ERCC6LQ2NKX8 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ERCC6LQ2NKX8 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.29■□□□□ 0.52
ERCC6LQ2NKX8 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
ERCC6LQ2NKX8 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.29■□□□□ 0.52
ERCC6LQ2NKX8 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ERCC6LQ2NKX8 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ERCC6LQ2NKX8 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC18.29■□□□□ 0.52
ERCC6LQ2NKX8 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ERCC6LQ2NKX8 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ERCC6LQ2NKX8 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ERCC6LQ2NKX8 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
ERCC6LQ2NKX8 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ERCC6LQ2NKX8 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
ERCC6LQ2NKX8 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ERCC6LQ2NKX8 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC18.28■□□□□ 0.52
ERCC6LQ2NKX8 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC18.28■□□□□ 0.52
ERCC6LQ2NKX8 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ERCC6LQ2NKX8 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ERCC6LQ2NKX8 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ERCC6LQ2NKX8 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ERCC6LQ2NKX8 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ERCC6LQ2NKX8 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
ERCC6LQ2NKX8 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ERCC6LQ2NKX8 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ERCC6LQ2NKX8 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
ERCC6LQ2NKX8 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ERCC6LQ2NKX8 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ERCC6LQ2NKX8 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ERCC6LQ2NKX8 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ERCC6LQ2NKX8 AL355355.2-201ENST00000442321 338 ntBASIC18.28■□□□□ 0.52
ERCC6LQ2NKX8 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.28■□□□□ 0.52
ERCC6LQ2NKX8 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.28■□□□□ 0.52
ERCC6LQ2NKX8 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.28■□□□□ 0.52
ERCC6LQ2NKX8 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.28■□□□□ 0.52
ERCC6LQ2NKX8 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.28■□□□□ 0.52
ERCC6LQ2NKX8 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
ERCC6LQ2NKX8 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
ERCC6LQ2NKX8 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.28■□□□□ 0.52
ERCC6LQ2NKX8 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC18.28■□□□□ 0.52
ERCC6LQ2NKX8 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
ERCC6LQ2NKX8 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.28■□□□□ 0.52
ERCC6LQ2NKX8 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.28■□□□□ 0.52
ERCC6LQ2NKX8 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ERCC6LQ2NKX8 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ERCC6LQ2NKX8 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ERCC6LQ2NKX8 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC18.28■□□□□ 0.52
ERCC6LQ2NKX8 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ERCC6LQ2NKX8 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.28■□□□□ 0.52
ERCC6LQ2NKX8 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
ERCC6LQ2NKX8 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ERCC6LQ2NKX8 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ERCC6LQ2NKX8 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC18.27■□□□□ 0.52
ERCC6LQ2NKX8 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ERCC6LQ2NKX8 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ERCC6LQ2NKX8 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ERCC6LQ2NKX8 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
ERCC6LQ2NKX8 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
ERCC6LQ2NKX8 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ERCC6LQ2NKX8 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
ERCC6LQ2NKX8 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.27■□□□□ 0.52
ERCC6LQ2NKX8 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms