Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RSPO4Q2I0M5 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RSPO4Q2I0M5 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RSPO4Q2I0M5 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RSPO4Q2I0M5 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RSPO4Q2I0M5 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RSPO4Q2I0M5 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.58■□□□□ 0.24
RSPO4Q2I0M5 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RSPO4Q2I0M5 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.58■□□□□ 0.24
RSPO4Q2I0M5 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RSPO4Q2I0M5 AC087163.2-201ENST00000457299 853 ntBASIC16.58■□□□□ 0.24
RSPO4Q2I0M5 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC16.58■□□□□ 0.24
RSPO4Q2I0M5 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.58■□□□□ 0.24
RSPO4Q2I0M5 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.58■□□□□ 0.24
RSPO4Q2I0M5 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RSPO4Q2I0M5 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RSPO4Q2I0M5 KRT8P44-201ENST00000441609 1350 ntBASIC16.58■□□□□ 0.24
RSPO4Q2I0M5 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
RSPO4Q2I0M5 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RSPO4Q2I0M5 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
RSPO4Q2I0M5 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
RSPO4Q2I0M5 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.58■□□□□ 0.24
RSPO4Q2I0M5 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RSPO4Q2I0M5 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RSPO4Q2I0M5 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RSPO4Q2I0M5 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RSPO4Q2I0M5 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.58■□□□□ 0.24
RSPO4Q2I0M5 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RSPO4Q2I0M5 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RSPO4Q2I0M5 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RSPO4Q2I0M5 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RSPO4Q2I0M5 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.57■□□□□ 0.24
RSPO4Q2I0M5 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RSPO4Q2I0M5 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RSPO4Q2I0M5 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RSPO4Q2I0M5 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RSPO4Q2I0M5 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
RSPO4Q2I0M5 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.57■□□□□ 0.24
RSPO4Q2I0M5 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RSPO4Q2I0M5 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.57■□□□□ 0.24
RSPO4Q2I0M5 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RSPO4Q2I0M5 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RSPO4Q2I0M5 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC16.57■□□□□ 0.24
RSPO4Q2I0M5 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.57■□□□□ 0.24
RSPO4Q2I0M5 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RSPO4Q2I0M5 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RSPO4Q2I0M5 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.57■□□□□ 0.24
RSPO4Q2I0M5 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.57■□□□□ 0.24
RSPO4Q2I0M5 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.57■□□□□ 0.24
RSPO4Q2I0M5 AP000842.3-202ENST00000569238 1080 ntBASIC16.57■□□□□ 0.24
RSPO4Q2I0M5 MIR4515-201ENST00000584082 81 ntBASIC16.57■□□□□ 0.24
RSPO4Q2I0M5 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.57■□□□□ 0.24
RSPO4Q2I0M5 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.57■□□□□ 0.24
RSPO4Q2I0M5 AC099568.2-201ENST00000609194 695 ntBASIC16.57■□□□□ 0.24
RSPO4Q2I0M5 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RSPO4Q2I0M5 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RSPO4Q2I0M5 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RSPO4Q2I0M5 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.57■□□□□ 0.24
RSPO4Q2I0M5 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RSPO4Q2I0M5 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
RSPO4Q2I0M5 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.56■□□□□ 0.24
RSPO4Q2I0M5 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RSPO4Q2I0M5 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.56■□□□□ 0.24
RSPO4Q2I0M5 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RSPO4Q2I0M5 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
RSPO4Q2I0M5 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RSPO4Q2I0M5 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RSPO4Q2I0M5 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RSPO4Q2I0M5 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RSPO4Q2I0M5 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RSPO4Q2I0M5 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RSPO4Q2I0M5 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RSPO4Q2I0M5 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.56■□□□□ 0.24
RSPO4Q2I0M5 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.56■□□□□ 0.24
RSPO4Q2I0M5 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RSPO4Q2I0M5 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.56■□□□□ 0.24
RSPO4Q2I0M5 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RSPO4Q2I0M5 AL512343.1-201ENST00000605837 169 ntBASIC16.56■□□□□ 0.24
RSPO4Q2I0M5 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
RSPO4Q2I0M5 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RSPO4Q2I0M5 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RSPO4Q2I0M5 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RSPO4Q2I0M5 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RSPO4Q2I0M5 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RSPO4Q2I0M5 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.55■□□□□ 0.24
RSPO4Q2I0M5 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
RSPO4Q2I0M5 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.55■□□□□ 0.24
RSPO4Q2I0M5 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.55■□□□□ 0.24
RSPO4Q2I0M5 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.55■□□□□ 0.24
RSPO4Q2I0M5 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RSPO4Q2I0M5 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RSPO4Q2I0M5 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.55■□□□□ 0.24
RSPO4Q2I0M5 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.55■□□□□ 0.24
RSPO4Q2I0M5 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.55■□□□□ 0.24
RSPO4Q2I0M5 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RSPO4Q2I0M5 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RSPO4Q2I0M5 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RSPO4Q2I0M5 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
RSPO4Q2I0M5 AC092506.1-202ENST00000401022 528 ntBASIC16.55■□□□□ 0.24
RSPO4Q2I0M5 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms