Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMGCS1Q01581 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HMGCS1Q01581 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HMGCS1Q01581 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.64■□□□□ 0.25
HMGCS1Q01581 DRAXINP1-201ENST00000437611 948 ntBASIC16.64■□□□□ 0.25
HMGCS1Q01581 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMGCS1Q01581 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.64■□□□□ 0.25
HMGCS1Q01581 MINOS1P3-201ENST00000457048 203 ntBASIC16.64■□□□□ 0.25
HMGCS1Q01581 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.64■□□□□ 0.25
HMGCS1Q01581 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.64■□□□□ 0.25
HMGCS1Q01581 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.64■□□□□ 0.25
HMGCS1Q01581 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
HMGCS1Q01581 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
HMGCS1Q01581 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
HMGCS1Q01581 Z69720.1-201ENST00000601483 472 ntBASIC16.64■□□□□ 0.25
HMGCS1Q01581 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.64■□□□□ 0.25
HMGCS1Q01581 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HMGCS1Q01581 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
HMGCS1Q01581 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HMGCS1Q01581 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMGCS1Q01581 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMGCS1Q01581 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
HMGCS1Q01581 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMGCS1Q01581 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMGCS1Q01581 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMGCS1Q01581 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMGCS1Q01581 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMGCS1Q01581 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
HMGCS1Q01581 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.63■□□□□ 0.25
HMGCS1Q01581 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.63■□□□□ 0.25
HMGCS1Q01581 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.63■□□□□ 0.25
HMGCS1Q01581 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
HMGCS1Q01581 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HMGCS1Q01581 AL118508.1-201ENST00000613502 2345 ntBASIC16.63■□□□□ 0.25
HMGCS1Q01581 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
HMGCS1Q01581 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HMGCS1Q01581 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HMGCS1Q01581 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HMGCS1Q01581 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.63■□□□□ 0.25
HMGCS1Q01581 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
HMGCS1Q01581 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
HMGCS1Q01581 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
HMGCS1Q01581 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HMGCS1Q01581 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HMGCS1Q01581 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
HMGCS1Q01581 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.63■□□□□ 0.25
HMGCS1Q01581 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.63■□□□□ 0.25
HMGCS1Q01581 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.63■□□□□ 0.25
HMGCS1Q01581 LINC00265-3P-201ENST00000447588 903 ntBASIC16.63■□□□□ 0.25
HMGCS1Q01581 KRT17P6-201ENST00000453795 1220 ntBASIC16.63■□□□□ 0.25
HMGCS1Q01581 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HMGCS1Q01581 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HMGCS1Q01581 AC096582.2-201ENST00000510860 516 ntBASIC16.63■□□□□ 0.25
HMGCS1Q01581 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.63■□□□□ 0.25
HMGCS1Q01581 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HMGCS1Q01581 BNIP3P18-201ENST00000593976 575 ntBASIC16.63■□□□□ 0.25
HMGCS1Q01581 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.63■□□□□ 0.25
HMGCS1Q01581 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.63■□□□□ 0.25
HMGCS1Q01581 AD001527.2-201ENST00000622994 785 ntBASIC16.63■□□□□ 0.25
HMGCS1Q01581 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.63■□□□□ 0.25
HMGCS1Q01581 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HMGCS1Q01581 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
HMGCS1Q01581 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HMGCS1Q01581 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.63■□□□□ 0.25
HMGCS1Q01581 EGFEM1P-202ENST00000431685 1563 ntBASIC16.63■□□□□ 0.25
HMGCS1Q01581 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HMGCS1Q01581 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HMGCS1Q01581 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.63■□□□□ 0.25
HMGCS1Q01581 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.63■□□□□ 0.25
HMGCS1Q01581 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HMGCS1Q01581 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.62■□□□□ 0.25
HMGCS1Q01581 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HMGCS1Q01581 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HMGCS1Q01581 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.62■□□□□ 0.25
HMGCS1Q01581 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.62■□□□□ 0.25
HMGCS1Q01581 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.62■□□□□ 0.25
HMGCS1Q01581 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HMGCS1Q01581 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HMGCS1Q01581 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
HMGCS1Q01581 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.62■□□□□ 0.25
HMGCS1Q01581 NSUN5P1-202ENST00000421140 1535 ntBASIC16.62■□□□□ 0.25
HMGCS1Q01581 NSUN5P2-203ENST00000457352 1529 ntBASIC16.62■□□□□ 0.25
HMGCS1Q01581 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HMGCS1Q01581 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HMGCS1Q01581 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.62■□□□□ 0.25
HMGCS1Q01581 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.62■□□□□ 0.25
HMGCS1Q01581 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.62■□□□□ 0.25
HMGCS1Q01581 KLF4P1-201ENST00000412782 1185 ntBASIC16.62■□□□□ 0.25
HMGCS1Q01581 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.62■□□□□ 0.25
HMGCS1Q01581 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
HMGCS1Q01581 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.62■□□□□ 0.25
HMGCS1Q01581 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.62■□□□□ 0.25
HMGCS1Q01581 AC073592.5-201ENST00000624854 528 ntBASIC16.62■□□□□ 0.25
HMGCS1Q01581 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HMGCS1Q01581 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
HMGCS1Q01581 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
HMGCS1Q01581 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HMGCS1Q01581 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
HMGCS1Q01581 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.62■□□□□ 0.25
HMGCS1Q01581 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms