Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ASIC1P78348 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ASIC1P78348 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ASIC1P78348 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
ASIC1P78348 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ASIC1P78348 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ASIC1P78348 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.26■□□□□ 0.67
ASIC1P78348 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ASIC1P78348 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.25■□□□□ 0.67
ASIC1P78348 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.25■□□□□ 0.67
ASIC1P78348 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
ASIC1P78348 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
ASIC1P78348 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
ASIC1P78348 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ASIC1P78348 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ASIC1P78348 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ASIC1P78348 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ASIC1P78348 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
ASIC1P78348 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ASIC1P78348 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.25■□□□□ 0.67
ASIC1P78348 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
ASIC1P78348 AP001269.4-201ENST00000609611 512 ntBASIC19.25■□□□□ 0.67
ASIC1P78348 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ASIC1P78348 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ASIC1P78348 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ASIC1P78348 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.25■□□□□ 0.67
ASIC1P78348 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ASIC1P78348 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
ASIC1P78348 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.25■□□□□ 0.67
ASIC1P78348 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
ASIC1P78348 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ASIC1P78348 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.24■□□□□ 0.67
ASIC1P78348 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ASIC1P78348 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ASIC1P78348 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ASIC1P78348 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ASIC1P78348 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ASIC1P78348 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ASIC1P78348 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
ASIC1P78348 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ASIC1P78348 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ASIC1P78348 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.24■□□□□ 0.67
ASIC1P78348 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.24■□□□□ 0.67
ASIC1P78348 NUS1P1-201ENST00000446295 882 ntBASIC19.24■□□□□ 0.67
ASIC1P78348 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.24■□□□□ 0.67
ASIC1P78348 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.24■□□□□ 0.67
ASIC1P78348 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.24■□□□□ 0.67
ASIC1P78348 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ASIC1P78348 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.24■□□□□ 0.67
ASIC1P78348 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ASIC1P78348 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.24■□□□□ 0.67
ASIC1P78348 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.24■□□□□ 0.67
ASIC1P78348 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ASIC1P78348 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ASIC1P78348 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ASIC1P78348 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC19.24■□□□□ 0.67
ASIC1P78348 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ASIC1P78348 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.24■□□□□ 0.67
ASIC1P78348 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ASIC1P78348 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ASIC1P78348 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ASIC1P78348 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ASIC1P78348 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ASIC1P78348 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ASIC1P78348 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ASIC1P78348 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
ASIC1P78348 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ASIC1P78348 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
ASIC1P78348 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ASIC1P78348 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ASIC1P78348 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
ASIC1P78348 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ASIC1P78348 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ASIC1P78348 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ASIC1P78348 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC19.23■□□□□ 0.67
ASIC1P78348 NKILA-202ENST00000614771 2598 ntBASIC19.23■□□□□ 0.67
ASIC1P78348 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ASIC1P78348 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ASIC1P78348 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ASIC1P78348 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ASIC1P78348 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
ASIC1P78348 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.23■□□□□ 0.67
ASIC1P78348 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.23■□□□□ 0.67
ASIC1P78348 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.23■□□□□ 0.67
ASIC1P78348 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.23■□□□□ 0.67
ASIC1P78348 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.23■□□□□ 0.67
ASIC1P78348 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.23■□□□□ 0.67
ASIC1P78348 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.23■□□□□ 0.67
ASIC1P78348 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.23■□□□□ 0.67
ASIC1P78348 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ASIC1P78348 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
ASIC1P78348 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.23■□□□□ 0.67
ASIC1P78348 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
ASIC1P78348 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ASIC1P78348 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ASIC1P78348 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ASIC1P78348 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.22■□□□□ 0.67
ASIC1P78348 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ASIC1P78348 AC079776.2-201ENST00000641154 1609 ntBASIC19.22■□□□□ 0.67
ASIC1P78348 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms