Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
CLDN6P56747 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN6P56747 MIR943-201ENST00000401286 94 ntBASIC16.51■□□□□ 0.23
CLDN6P56747 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.51■□□□□ 0.23
CLDN6P56747 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN6P56747 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.51■□□□□ 0.23
CLDN6P56747 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.51■□□□□ 0.23
CLDN6P56747 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.51■□□□□ 0.23
CLDN6P56747 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.51■□□□□ 0.23
CLDN6P56747 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.51■□□□□ 0.23
CLDN6P56747 AC116407.2-201ENST00000613639 860 ntBASIC16.51■□□□□ 0.23
CLDN6P56747 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.51■□□□□ 0.23
CLDN6P56747 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.51■□□□□ 0.23
CLDN6P56747 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN6P56747 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CLDN6P56747 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN6P56747 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.51■□□□□ 0.23
CLDN6P56747 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN6P56747 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN6P56747 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CLDN6P56747 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN6P56747 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.51■□□□□ 0.23
CLDN6P56747 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CLDN6P56747 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CLDN6P56747 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CLDN6P56747 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN6P56747 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN6P56747 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN6P56747 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.5■□□□□ 0.23
CLDN6P56747 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.5■□□□□ 0.23
CLDN6P56747 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CLDN6P56747 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN6P56747 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN6P56747 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.5■□□□□ 0.23
CLDN6P56747 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.5■□□□□ 0.23
CLDN6P56747 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN6P56747 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.5■□□□□ 0.23
CLDN6P56747 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN6P56747 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CLDN6P56747 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN6P56747 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CLDN6P56747 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.5■□□□□ 0.23
CLDN6P56747 AC002472.2-201ENST00000442739 958 ntBASIC16.5■□□□□ 0.23
CLDN6P56747 AL592309.1-201ENST00000443127 649 ntBASIC16.5■□□□□ 0.23
CLDN6P56747 SPDYE11-202ENST00000450699 704 ntBASIC16.5■□□□□ 0.23
CLDN6P56747 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN6P56747 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN6P56747 AC190387.1-201ENST00000551683 408 ntBASIC16.5■□□□□ 0.23
CLDN6P56747 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CLDN6P56747 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.5■□□□□ 0.23
CLDN6P56747 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN6P56747 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.5■□□□□ 0.23
CLDN6P56747 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN6P56747 SPDYE9P-201ENST00000570642 692 ntBASIC16.5■□□□□ 0.23
CLDN6P56747 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN6P56747 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.5■□□□□ 0.23
CLDN6P56747 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN6P56747 SPDYE10P-202ENST00000612005 668 ntBASIC16.5■□□□□ 0.23
CLDN6P56747 SPDYE8P-202ENST00000612377 668 ntBASIC16.5■□□□□ 0.23
CLDN6P56747 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN6P56747 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.5■□□□□ 0.23
CLDN6P56747 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN6P56747 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.5■□□□□ 0.23
CLDN6P56747 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
CLDN6P56747 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.5■□□□□ 0.23
CLDN6P56747 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN6P56747 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN6P56747 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN6P56747 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CLDN6P56747 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN6P56747 LETM1P2-201ENST00000597330 2178 ntBASIC16.5■□□□□ 0.23
CLDN6P56747 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.5■□□□□ 0.23
CLDN6P56747 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN6P56747 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN6P56747 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN6P56747 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN6P56747 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN6P56747 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN6P56747 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN6P56747 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN6P56747 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CLDN6P56747 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.49■□□□□ 0.23
CLDN6P56747 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN6P56747 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN6P56747 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN6P56747 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN6P56747 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CLDN6P56747 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.49■□□□□ 0.23
CLDN6P56747 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN6P56747 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN6P56747 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CLDN6P56747 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.49■□□□□ 0.23
CLDN6P56747 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN6P56747 AC055876.3-201ENST00000431496 288 ntBASIC16.49■□□□□ 0.23
CLDN6P56747 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.49■□□□□ 0.23
CLDN6P56747 DDX43P3-201ENST00000441064 443 ntBASIC16.49■□□□□ 0.23
CLDN6P56747 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.49■□□□□ 0.23
CLDN6P56747 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.49■□□□□ 0.23
CLDN6P56747 AC079140.1-201ENST00000508039 487 ntBASIC16.49■□□□□ 0.23
CLDN6P56747 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms