Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
CMC4P56277 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CMC4P56277 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CMC4P56277 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CMC4P56277 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC12.84□□□□□ -0.35
CMC4P56277 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CMC4P56277 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CMC4P56277 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CMC4P56277 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CMC4P56277 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CMC4P56277 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CMC4P56277 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CMC4P56277 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CMC4P56277 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC12.84□□□□□ -0.35
CMC4P56277 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CMC4P56277 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CMC4P56277 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CMC4P56277 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC12.84□□□□□ -0.35
CMC4P56277 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CMC4P56277 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
CMC4P56277 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CMC4P56277 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CMC4P56277 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC12.84□□□□□ -0.35
CMC4P56277 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC12.84□□□□□ -0.35
CMC4P56277 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
CMC4P56277 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
CMC4P56277 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
CMC4P56277 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC12.84□□□□□ -0.35
CMC4P56277 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
CMC4P56277 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CMC4P56277 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CMC4P56277 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CMC4P56277 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CMC4P56277 AL023806.1-201ENST00000603994 1649 ntBASIC12.84□□□□□ -0.35
CMC4P56277 AC148477.5-201ENST00000625164 1645 ntBASIC12.84□□□□□ -0.35
CMC4P56277 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CMC4P56277 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CMC4P56277 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
CMC4P56277 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CMC4P56277 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CMC4P56277 AC068880.1-201ENST00000507289 2297 ntBASIC12.83□□□□□ -0.35
CMC4P56277 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.35
CMC4P56277 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.35
CMC4P56277 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
CMC4P56277 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
CMC4P56277 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC12.83□□□□□ -0.35
CMC4P56277 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CMC4P56277 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC12.83□□□□□ -0.36
CMC4P56277 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CMC4P56277 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC12.83□□□□□ -0.36
CMC4P56277 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
CMC4P56277 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CMC4P56277 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CMC4P56277 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CMC4P56277 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
CMC4P56277 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CMC4P56277 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CMC4P56277 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
CMC4P56277 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CMC4P56277 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CMC4P56277 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CMC4P56277 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
CMC4P56277 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CMC4P56277 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CMC4P56277 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC12.83□□□□□ -0.36
CMC4P56277 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC12.83□□□□□ -0.36
CMC4P56277 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC12.83□□□□□ -0.36
CMC4P56277 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CMC4P56277 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC12.83□□□□□ -0.36
CMC4P56277 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
CMC4P56277 RPS29-206ENST00000557111 488 ntTSL 2 BASIC12.83□□□□□ -0.36
CMC4P56277 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC12.83□□□□□ -0.36
CMC4P56277 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC12.83□□□□□ -0.36
CMC4P56277 SDCCAG3P1-201ENST00000589292 1150 ntBASIC12.83□□□□□ -0.36
CMC4P56277 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CMC4P56277 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC12.83□□□□□ -0.36
CMC4P56277 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC12.83□□□□□ -0.36
CMC4P56277 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC12.83□□□□□ -0.36
CMC4P56277 AL805961.1-202ENST00000641562 540 ntBASIC12.83□□□□□ -0.36
CMC4P56277 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC12.83□□□□□ -0.36
CMC4P56277 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CMC4P56277 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CMC4P56277 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CMC4P56277 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC12.83□□□□□ -0.36
CMC4P56277 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CMC4P56277 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CMC4P56277 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC12.83□□□□□ -0.36
CMC4P56277 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CMC4P56277 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC12.83□□□□□ -0.36
CMC4P56277 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC12.83□□□□□ -0.36
CMC4P56277 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC12.83□□□□□ -0.36
CMC4P56277 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CMC4P56277 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CMC4P56277 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CMC4P56277 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CMC4P56277 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CMC4P56277 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CMC4P56277 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CMC4P56277 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CMC4P56277 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms