Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 KRT18P21-201ENST00000515767 1272 ntBASIC16.89■□□□□ 0.29
CDH13P55290 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.89■□□□□ 0.29
CDH13P55290 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CDH13P55290 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.89■□□□□ 0.29
CDH13P55290 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH13P55290 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH13P55290 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH13P55290 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.89■□□□□ 0.29
CDH13P55290 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
CDH13P55290 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH13P55290 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH13P55290 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH13P55290 AC005332.1-201ENST00000577698 1310 ntBASIC16.89■□□□□ 0.29
CDH13P55290 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH13P55290 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDH13P55290 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH13P55290 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.89■□□□□ 0.29
CDH13P55290 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH13P55290 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.88■□□□□ 0.29
CDH13P55290 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.88■□□□□ 0.29
CDH13P55290 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH13P55290 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH13P55290 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.88■□□□□ 0.29
CDH13P55290 AL135999.2-201ENST00000622438 1686 ntBASIC16.88■□□□□ 0.29
CDH13P55290 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH13P55290 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH13P55290 AL353593.2-201ENST00000602529 1483 ntBASIC16.88■□□□□ 0.29
CDH13P55290 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDH13P55290 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CDH13P55290 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH13P55290 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH13P55290 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH13P55290 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH13P55290 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.88■□□□□ 0.29
CDH13P55290 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
CDH13P55290 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDH13P55290 BX276092.5-203ENST00000456199 560 ntBASIC16.88■□□□□ 0.29
CDH13P55290 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDH13P55290 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CDH13P55290 NTF6B-201ENST00000591913 560 ntBASIC16.88■□□□□ 0.29
CDH13P55290 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDH13P55290 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.88■□□□□ 0.29
CDH13P55290 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH13P55290 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH13P55290 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDH13P55290 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDH13P55290 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDH13P55290 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH13P55290 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH13P55290 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.88■□□□□ 0.29
CDH13P55290 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH13P55290 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CDH13P55290 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH13P55290 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDH13P55290 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH13P55290 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.88■□□□□ 0.29
CDH13P55290 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH13P55290 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.88■□□□□ 0.29
CDH13P55290 AC016734.2-201ENST00000624325 1377 ntBASIC16.88■□□□□ 0.29
CDH13P55290 AC018695.7-201ENST00000624587 2492 ntBASIC16.88■□□□□ 0.29
CDH13P55290 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CDH13P55290 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH13P55290 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH13P55290 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH13P55290 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.88■□□□□ 0.29
CDH13P55290 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH13P55290 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CDH13P55290 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH13P55290 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH13P55290 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH13P55290 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH13P55290 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.87■□□□□ 0.29
CDH13P55290 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.87■□□□□ 0.29
CDH13P55290 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.87■□□□□ 0.29
CDH13P55290 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.87■□□□□ 0.29
CDH13P55290 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH13P55290 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.87■□□□□ 0.29
CDH13P55290 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH13P55290 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.87■□□□□ 0.29
CDH13P55290 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH13P55290 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CDH13P55290 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.87■□□□□ 0.29
CDH13P55290 AC246785.2-201ENST00000432512 513 ntBASIC16.87■□□□□ 0.29
CDH13P55290 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.87■□□□□ 0.29
CDH13P55290 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.87■□□□□ 0.29
CDH13P55290 AC009533.2-201ENST00000543664 586 ntBASIC16.87■□□□□ 0.29
CDH13P55290 AL121672.3-201ENST00000608644 468 ntBASIC16.87■□□□□ 0.29
CDH13P55290 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.87■□□□□ 0.29
CDH13P55290 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.87■□□□□ 0.29
CDH13P55290 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CDH13P55290 AC078925.2-201ENST00000624013 1973 ntBASIC16.87■□□□□ 0.29
CDH13P55290 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.87■□□□□ 0.29
CDH13P55290 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH13P55290 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH13P55290 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH13P55290 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH13P55290 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH13P55290 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH13P55290 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH13P55290 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms