Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
BRPF1P55201 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
BRPF1P55201 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
BRPF1P55201 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
BRPF1P55201 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
BRPF1P55201 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
BRPF1P55201 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
BRPF1P55201 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC21.93■■□□□ 1.1
BRPF1P55201 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC21.93■■□□□ 1.1
BRPF1P55201 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
BRPF1P55201 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC21.93■■□□□ 1.1
BRPF1P55201 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
BRPF1P55201 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
BRPF1P55201 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
BRPF1P55201 URGCP-206ENST00000446958 365 ntTSL 2 BASIC21.93■■□□□ 1.1
BRPF1P55201 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC21.93■■□□□ 1.1
BRPF1P55201 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
BRPF1P55201 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC21.93■■□□□ 1.1
BRPF1P55201 SDCCAG3P1-201ENST00000589292 1150 ntBASIC21.93■■□□□ 1.1
BRPF1P55201 AC006557.2-201ENST00000592985 1240 ntBASIC21.93■■□□□ 1.1
BRPF1P55201 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
BRPF1P55201 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
BRPF1P55201 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC21.92■■□□□ 1.1
BRPF1P55201 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
BRPF1P55201 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
BRPF1P55201 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
BRPF1P55201 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
BRPF1P55201 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC21.92■■□□□ 1.1
BRPF1P55201 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
BRPF1P55201 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
BRPF1P55201 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC21.92■■□□□ 1.1
BRPF1P55201 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC21.92■■□□□ 1.1
BRPF1P55201 NABP1-203ENST00000409510 843 ntTSL 5 BASIC21.92■■□□□ 1.1
BRPF1P55201 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC21.92■■□□□ 1.1
BRPF1P55201 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC21.92■■□□□ 1.1
BRPF1P55201 PGAM5P1-201ENST00000518923 814 ntBASIC21.92■■□□□ 1.1
BRPF1P55201 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC21.92■■□□□ 1.1
BRPF1P55201 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
BRPF1P55201 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC21.92■■□□□ 1.1
BRPF1P55201 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
BRPF1P55201 AC008735.5-201ENST00000623544 497 ntBASIC21.92■■□□□ 1.1
BRPF1P55201 AL805961.1-202ENST00000641562 540 ntBASIC21.92■■□□□ 1.1
BRPF1P55201 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
BRPF1P55201 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
BRPF1P55201 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
BRPF1P55201 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
BRPF1P55201 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
BRPF1P55201 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC21.91■■□□□ 1.1
BRPF1P55201 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
BRPF1P55201 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
BRPF1P55201 AC006504.4-201ENST00000592118 1568 ntBASIC21.91■■□□□ 1.1
BRPF1P55201 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC21.91■■□□□ 1.1
BRPF1P55201 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC21.91■■□□□ 1.1
BRPF1P55201 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
BRPF1P55201 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
BRPF1P55201 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
BRPF1P55201 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC21.91■■□□□ 1.1
BRPF1P55201 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
BRPF1P55201 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
BRPF1P55201 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
BRPF1P55201 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
BRPF1P55201 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
BRPF1P55201 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC21.91■■□□□ 1.1
BRPF1P55201 UPF3AP3-201ENST00000420996 769 ntBASIC21.91■■□□□ 1.1
BRPF1P55201 RPS2P1-201ENST00000434010 821 ntBASIC21.91■■□□□ 1.1
BRPF1P55201 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
BRPF1P55201 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC21.91■■□□□ 1.1
BRPF1P55201 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC21.91■■□□□ 1.1
BRPF1P55201 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
BRPF1P55201 CAND2-206ENST00000626378 333 ntTSL 5 BASIC21.91■■□□□ 1.1
BRPF1P55201 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
BRPF1P55201 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
BRPF1P55201 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
BRPF1P55201 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
BRPF1P55201 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC21.91■■□□□ 1.1
BRPF1P55201 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
BRPF1P55201 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC21.91■■□□□ 1.1
BRPF1P55201 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
BRPF1P55201 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC21.91■■□□□ 1.1
BRPF1P55201 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC21.91■■□□□ 1.1
BRPF1P55201 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC21.91■■□□□ 1.1
BRPF1P55201 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
BRPF1P55201 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
BRPF1P55201 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
BRPF1P55201 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC21.9■■□□□ 1.1
BRPF1P55201 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
BRPF1P55201 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
BRPF1P55201 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
BRPF1P55201 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
BRPF1P55201 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
BRPF1P55201 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
BRPF1P55201 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
BRPF1P55201 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC21.9■■□□□ 1.1
BRPF1P55201 OR7E14P-202ENST00000530490 1290 ntBASIC21.9■■□□□ 1.1
BRPF1P55201 CFL1-212ENST00000531413 636 ntTSL 3 BASIC21.9■■□□□ 1.1
BRPF1P55201 LITAF-211ENST00000572255 516 ntTSL 4 BASIC21.9■■□□□ 1.1
BRPF1P55201 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
BRPF1P55201 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC21.9■■□□□ 1.1
BRPF1P55201 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC21.9■■□□□ 1.1
BRPF1P55201 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms