Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.66■□□□□ 0.58
PDE6CP51160 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDE6CP51160 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.66■□□□□ 0.58
PDE6CP51160 AL355877.3-201ENST00000622820 899 ntBASIC18.66■□□□□ 0.58
PDE6CP51160 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.66■□□□□ 0.58
PDE6CP51160 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDE6CP51160 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDE6CP51160 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
PDE6CP51160 AC116353.5-201ENST00000638148 1699 ntBASIC18.66■□□□□ 0.58
PDE6CP51160 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDE6CP51160 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDE6CP51160 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDE6CP51160 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDE6CP51160 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.66■□□□□ 0.58
PDE6CP51160 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.66■□□□□ 0.58
PDE6CP51160 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDE6CP51160 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDE6CP51160 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.65■□□□□ 0.58
PDE6CP51160 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.65■□□□□ 0.58
PDE6CP51160 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDE6CP51160 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.65■□□□□ 0.58
PDE6CP51160 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
PDE6CP51160 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDE6CP51160 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PDE6CP51160 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
PDE6CP51160 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDE6CP51160 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.65■□□□□ 0.58
PDE6CP51160 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDE6CP51160 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.65■□□□□ 0.58
PDE6CP51160 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.65■□□□□ 0.58
PDE6CP51160 AL773604.1-201ENST00000617417 272 ntBASIC18.65■□□□□ 0.58
PDE6CP51160 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDE6CP51160 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDE6CP51160 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDE6CP51160 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDE6CP51160 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDE6CP51160 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDE6CP51160 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PDE6CP51160 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.65■□□□□ 0.58
PDE6CP51160 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
PDE6CP51160 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDE6CP51160 AL353593.2-201ENST00000602529 1483 ntBASIC18.65■□□□□ 0.58
PDE6CP51160 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
PDE6CP51160 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PDE6CP51160 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PDE6CP51160 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PDE6CP51160 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.64■□□□□ 0.58
PDE6CP51160 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.64■□□□□ 0.58
PDE6CP51160 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
PDE6CP51160 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
PDE6CP51160 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
PDE6CP51160 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDE6CP51160 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PDE6CP51160 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDE6CP51160 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDE6CP51160 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.64■□□□□ 0.57
PDE6CP51160 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDE6CP51160 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDE6CP51160 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDE6CP51160 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDE6CP51160 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDE6CP51160 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.64■□□□□ 0.57
PDE6CP51160 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
PDE6CP51160 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDE6CP51160 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.64■□□□□ 0.57
PDE6CP51160 FAM197Y8-203ENST00000450145 560 ntBASIC18.64■□□□□ 0.57
PDE6CP51160 STK25P1-201ENST00000585406 838 ntBASIC18.64■□□□□ 0.57
PDE6CP51160 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PDE6CP51160 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.64■□□□□ 0.57
PDE6CP51160 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.64■□□□□ 0.57
PDE6CP51160 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
PDE6CP51160 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.64■□□□□ 0.57
PDE6CP51160 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PDE6CP51160 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PDE6CP51160 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDE6CP51160 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PDE6CP51160 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDE6CP51160 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDE6CP51160 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PDE6CP51160 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDE6CP51160 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDE6CP51160 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PDE6CP51160 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE6CP51160 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PDE6CP51160 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.63■□□□□ 0.57
PDE6CP51160 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE6CP51160 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
PDE6CP51160 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PDE6CP51160 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE6CP51160 KRT18P67-201ENST00000432816 1264 ntBASIC18.63■□□□□ 0.57
PDE6CP51160 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.63■□□□□ 0.57
PDE6CP51160 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.63■□□□□ 0.57
PDE6CP51160 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PDE6CP51160 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE6CP51160 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PDE6CP51160 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE6CP51160 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE6CP51160 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDE6CP51160 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PDE6CP51160 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms