Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RNF144AP50876 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
RNF144AP50876 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF144AP50876 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF144AP50876 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
RNF144AP50876 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF144AP50876 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF144AP50876 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.07■□□□□ 0.16
RNF144AP50876 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
RNF144AP50876 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF144AP50876 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF144AP50876 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF144AP50876 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF144AP50876 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF144AP50876 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF144AP50876 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
RNF144AP50876 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
RNF144AP50876 AC002558.1-201ENST00000488906 803 ntBASIC16.07■□□□□ 0.16
RNF144AP50876 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.07■□□□□ 0.16
RNF144AP50876 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.07■□□□□ 0.16
RNF144AP50876 AC012615.1-201ENST00000565797 1299 ntBASIC16.07■□□□□ 0.16
RNF144AP50876 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF144AP50876 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
RNF144AP50876 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RNF144AP50876 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.07■□□□□ 0.16
RNF144AP50876 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF144AP50876 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
RNF144AP50876 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
RNF144AP50876 AC046185.3-201ENST00000623228 1824 ntBASIC16.07■□□□□ 0.16
RNF144AP50876 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF144AP50876 AC060834.1-201ENST00000443027 2032 ntBASIC16.07■□□□□ 0.16
RNF144AP50876 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF144AP50876 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RNF144AP50876 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.07■□□□□ 0.16
RNF144AP50876 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF144AP50876 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
RNF144AP50876 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF144AP50876 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF144AP50876 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.06■□□□□ 0.16
RNF144AP50876 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF144AP50876 AC011676.5-201ENST00000624864 2660 ntBASIC16.06■□□□□ 0.16
RNF144AP50876 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF144AP50876 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
RNF144AP50876 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.06■□□□□ 0.16
RNF144AP50876 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.06■□□□□ 0.16
RNF144AP50876 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF144AP50876 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF144AP50876 INTS4P1-201ENST00000438455 1935 ntBASIC16.06■□□□□ 0.16
RNF144AP50876 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF144AP50876 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.06■□□□□ 0.16
RNF144AP50876 AC132938.5-201ENST00000624980 1813 ntBASIC16.06■□□□□ 0.16
RNF144AP50876 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF144AP50876 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF144AP50876 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
RNF144AP50876 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF144AP50876 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF144AP50876 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF144AP50876 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF144AP50876 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.06■□□□□ 0.16
RNF144AP50876 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
RNF144AP50876 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
RNF144AP50876 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
RNF144AP50876 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF144AP50876 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF144AP50876 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.06■□□□□ 0.16
RNF144AP50876 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF144AP50876 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF144AP50876 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF144AP50876 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF144AP50876 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
RNF144AP50876 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.05■□□□□ 0.16
RNF144AP50876 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF144AP50876 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RNF144AP50876 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
RNF144AP50876 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.05■□□□□ 0.16
RNF144AP50876 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
RNF144AP50876 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RNF144AP50876 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF144AP50876 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RNF144AP50876 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RNF144AP50876 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF144AP50876 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RNF144AP50876 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF144AP50876 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RNF144AP50876 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RNF144AP50876 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
RNF144AP50876 STK33P1-201ENST00000423835 1218 ntBASIC16.05■□□□□ 0.16
RNF144AP50876 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.05■□□□□ 0.16
RNF144AP50876 AC122714.2-201ENST00000502787 707 ntBASIC16.05■□□□□ 0.16
RNF144AP50876 AC114341.1-201ENST00000618070 349 ntBASIC16.05■□□□□ 0.16
RNF144AP50876 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.05■□□□□ 0.16
RNF144AP50876 AC073592.5-201ENST00000624854 528 ntBASIC16.05■□□□□ 0.16
RNF144AP50876 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.05■□□□□ 0.16
RNF144AP50876 AC092053.1-201ENST00000605787 1936 ntBASIC16.05■□□□□ 0.16
RNF144AP50876 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
RNF144AP50876 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF144AP50876 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.05■□□□□ 0.16
RNF144AP50876 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.05■□□□□ 0.16
RNF144AP50876 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF144AP50876 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms