Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 AC090340.1-201ENST00000620778 4980 ntBASIC16.32■□□□□ 0.2
KNTC1P50748 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.32■□□□□ 0.2
KNTC1P50748 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KNTC1P50748 AL135999.2-201ENST00000622438 1686 ntBASIC16.32■□□□□ 0.2
KNTC1P50748 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
KNTC1P50748 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KNTC1P50748 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KNTC1P50748 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
KNTC1P50748 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.32■□□□□ 0.2
KNTC1P50748 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.31■□□□□ 0.2
KNTC1P50748 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KNTC1P50748 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
KNTC1P50748 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
KNTC1P50748 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
KNTC1P50748 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.31■□□□□ 0.2
KNTC1P50748 TSSK5P-201ENST00000423978 907 ntBASIC16.31■□□□□ 0.2
KNTC1P50748 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.31■□□□□ 0.2
KNTC1P50748 AP000842.3-202ENST00000569238 1080 ntBASIC16.31■□□□□ 0.2
KNTC1P50748 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.31■□□□□ 0.2
KNTC1P50748 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.31■□□□□ 0.2
KNTC1P50748 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.31■□□□□ 0.2
KNTC1P50748 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KNTC1P50748 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KNTC1P50748 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
KNTC1P50748 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KNTC1P50748 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
KNTC1P50748 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KNTC1P50748 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KNTC1P50748 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KNTC1P50748 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
KNTC1P50748 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KNTC1P50748 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
KNTC1P50748 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
KNTC1P50748 GK-202ENST00000378941 458 ntTSL 3 BASIC16.31■□□□□ 0.2
KNTC1P50748 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
KNTC1P50748 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.31■□□□□ 0.2
KNTC1P50748 AL359881.2-201ENST00000602973 570 ntBASIC16.31■□□□□ 0.2
KNTC1P50748 AL645728.2-201ENST00000641974 660 ntBASIC16.31■□□□□ 0.2
KNTC1P50748 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.31■□□□□ 0.2
KNTC1P50748 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.31■□□□□ 0.2
KNTC1P50748 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KNTC1P50748 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
KNTC1P50748 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
KNTC1P50748 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
KNTC1P50748 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.3■□□□□ 0.2
KNTC1P50748 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.3■□□□□ 0.2
KNTC1P50748 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.3■□□□□ 0.2
KNTC1P50748 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.3■□□□□ 0.2
KNTC1P50748 AC026150.2-201ENST00000564693 1156 ntBASIC16.3■□□□□ 0.2
KNTC1P50748 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
KNTC1P50748 AL390754.1-201ENST00000619088 582 ntBASIC16.3■□□□□ 0.2
KNTC1P50748 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KNTC1P50748 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.3■□□□□ 0.2
KNTC1P50748 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
KNTC1P50748 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KNTC1P50748 REXO1L9P-201ENST00000604264 2108 ntBASIC16.3■□□□□ 0.2
KNTC1P50748 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.3■□□□□ 0.2
KNTC1P50748 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
KNTC1P50748 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KNTC1P50748 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
KNTC1P50748 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KNTC1P50748 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KNTC1P50748 TUBB3P1-201ENST00000405796 1332 ntBASIC16.3■□□□□ 0.2
KNTC1P50748 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KNTC1P50748 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KNTC1P50748 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
KNTC1P50748 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
KNTC1P50748 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KNTC1P50748 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KNTC1P50748 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
KNTC1P50748 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KNTC1P50748 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KNTC1P50748 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.3■□□□□ 0.2
KNTC1P50748 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
KNTC1P50748 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
KNTC1P50748 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KNTC1P50748 RARRES2P8-201ENST00000566335 367 ntBASIC16.3■□□□□ 0.2
KNTC1P50748 MIR4515-201ENST00000584082 81 ntBASIC16.3■□□□□ 0.2
KNTC1P50748 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
KNTC1P50748 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KNTC1P50748 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.3■□□□□ 0.2
KNTC1P50748 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
KNTC1P50748 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KNTC1P50748 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.3■□□□□ 0.2
KNTC1P50748 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.3■□□□□ 0.2
KNTC1P50748 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KNTC1P50748 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KNTC1P50748 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.29■□□□□ 0.2
KNTC1P50748 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KNTC1P50748 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
KNTC1P50748 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KNTC1P50748 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KNTC1P50748 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
KNTC1P50748 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KNTC1P50748 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KNTC1P50748 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.29■□□□□ 0.2
KNTC1P50748 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.29■□□□□ 0.2
KNTC1P50748 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KNTC1P50748 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.29■□□□□ 0.2
KNTC1P50748 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms