Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NEDD4P46934 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NEDD4P46934 FRMD8P1-201ENST00000440433 1524 ntBASIC20.26■□□□□ 0.83
NEDD4P46934 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NEDD4P46934 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC20.26■□□□□ 0.83
NEDD4P46934 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC20.26■□□□□ 0.83
NEDD4P46934 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC20.26■□□□□ 0.83
NEDD4P46934 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NEDD4P46934 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NEDD4P46934 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC20.26■□□□□ 0.83
NEDD4P46934 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NEDD4P46934 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NEDD4P46934 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NEDD4P46934 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NEDD4P46934 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NEDD4P46934 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NEDD4P46934 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NEDD4P46934 AC108751.1-201ENST00000490852 363 ntBASIC20.26■□□□□ 0.83
NEDD4P46934 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC20.26■□□□□ 0.83
NEDD4P46934 AC034105.1-201ENST00000563488 319 ntBASIC20.26■□□□□ 0.83
NEDD4P46934 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC20.26■□□□□ 0.83
NEDD4P46934 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.26■□□□□ 0.83
NEDD4P46934 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC20.26■□□□□ 0.83
NEDD4P46934 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NEDD4P46934 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NEDD4P46934 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NEDD4P46934 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NEDD4P46934 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC20.25■□□□□ 0.83
NEDD4P46934 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NEDD4P46934 STX3-203ENST00000529177 1571 ntTSL 2 BASIC20.25■□□□□ 0.83
NEDD4P46934 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC20.25■□□□□ 0.83
NEDD4P46934 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NEDD4P46934 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
NEDD4P46934 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NEDD4P46934 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC20.25■□□□□ 0.83
NEDD4P46934 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.25■□□□□ 0.83
NEDD4P46934 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NEDD4P46934 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NEDD4P46934 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NEDD4P46934 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NEDD4P46934 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC20.25■□□□□ 0.83
NEDD4P46934 PI4KAP1-204ENST00000612579 1703 ntBASIC20.25■□□□□ 0.83
NEDD4P46934 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC20.25■□□□□ 0.83
NEDD4P46934 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NEDD4P46934 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NEDD4P46934 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NEDD4P46934 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
NEDD4P46934 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NEDD4P46934 TEX30-205ENST00000376029 959 ntTSL 2 BASIC20.25■□□□□ 0.83
NEDD4P46934 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NEDD4P46934 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.25■□□□□ 0.83
NEDD4P46934 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.25■□□□□ 0.83
NEDD4P46934 RPL13AP23-201ENST00000480739 586 ntBASIC20.25■□□□□ 0.83
NEDD4P46934 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.25■□□□□ 0.83
NEDD4P46934 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
NEDD4P46934 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NEDD4P46934 DUX4L17-201ENST00000557360 1267 ntBASIC20.25■□□□□ 0.83
NEDD4P46934 AC145285.3-201ENST00000564603 959 ntBASIC20.25■□□□□ 0.83
NEDD4P46934 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.25■□□□□ 0.83
NEDD4P46934 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NEDD4P46934 Z83851.2-201ENST00000609564 659 ntBASIC20.25■□□□□ 0.83
NEDD4P46934 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC20.25■□□□□ 0.83
NEDD4P46934 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NEDD4P46934 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC20.25■□□□□ 0.83
NEDD4P46934 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
NEDD4P46934 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
NEDD4P46934 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
NEDD4P46934 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NEDD4P46934 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NEDD4P46934 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NEDD4P46934 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC20.24■□□□□ 0.83
NEDD4P46934 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NEDD4P46934 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NEDD4P46934 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NEDD4P46934 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC20.24■□□□□ 0.83
NEDD4P46934 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NEDD4P46934 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NEDD4P46934 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC20.24■□□□□ 0.83
NEDD4P46934 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC20.24■□□□□ 0.83
NEDD4P46934 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NEDD4P46934 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
NEDD4P46934 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
NEDD4P46934 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NEDD4P46934 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
NEDD4P46934 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC20.24■□□□□ 0.83
NEDD4P46934 PGM5P2-202ENST00000637225 1043 ntBASIC20.24■□□□□ 0.83
NEDD4P46934 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
NEDD4P46934 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NEDD4P46934 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
NEDD4P46934 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NEDD4P46934 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC20.23■□□□□ 0.83
NEDD4P46934 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC20.23■□□□□ 0.83
NEDD4P46934 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC20.23■□□□□ 0.83
NEDD4P46934 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
NEDD4P46934 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NEDD4P46934 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC20.23■□□□□ 0.83
NEDD4P46934 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NEDD4P46934 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NEDD4P46934 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
NEDD4P46934 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms