Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.47■□□□□ 0.71
PRPHP41219 PRORSD1P-202ENST00000563365 2154 ntBASIC19.47■□□□□ 0.71
PRPHP41219 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRPHP41219 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRPHP41219 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PRPHP41219 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRPHP41219 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PRPHP41219 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.47■□□□□ 0.71
PRPHP41219 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRPHP41219 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PRPHP41219 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PRPHP41219 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
PRPHP41219 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
PRPHP41219 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PRPHP41219 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.47■□□□□ 0.71
PRPHP41219 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
PRPHP41219 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRPHP41219 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PRPHP41219 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.47■□□□□ 0.71
PRPHP41219 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.47■□□□□ 0.71
PRPHP41219 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRPHP41219 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRPHP41219 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRPHP41219 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PRPHP41219 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRPHP41219 FRMD8P1-201ENST00000440433 1524 ntBASIC19.46■□□□□ 0.71
PRPHP41219 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRPHP41219 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRPHP41219 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.46■□□□□ 0.71
PRPHP41219 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.46■□□□□ 0.71
PRPHP41219 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
PRPHP41219 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRPHP41219 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRPHP41219 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRPHP41219 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.46■□□□□ 0.71
PRPHP41219 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC19.46■□□□□ 0.71
PRPHP41219 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.46■□□□□ 0.71
PRPHP41219 MTDHP4-201ENST00000600287 670 ntBASIC19.46■□□□□ 0.71
PRPHP41219 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
PRPHP41219 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRPHP41219 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRPHP41219 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRPHP41219 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRPHP41219 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PRPHP41219 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRPHP41219 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PRPHP41219 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRPHP41219 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.45■□□□□ 0.7
PRPHP41219 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRPHP41219 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PRPHP41219 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRPHP41219 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PRPHP41219 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.45■□□□□ 0.7
PRPHP41219 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PRPHP41219 AC064862.7-201ENST00000604520 867 ntBASIC19.45■□□□□ 0.7
PRPHP41219 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.45■□□□□ 0.7
PRPHP41219 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRPHP41219 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.45■□□□□ 0.7
PRPHP41219 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRPHP41219 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRPHP41219 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRPHP41219 AL590787.1-201ENST00000568856 1315 ntBASIC19.45■□□□□ 0.7
PRPHP41219 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PRPHP41219 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRPHP41219 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PRPHP41219 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRPHP41219 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRPHP41219 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PRPHP41219 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
PRPHP41219 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
PRPHP41219 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PRPHP41219 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRPHP41219 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRPHP41219 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PRPHP41219 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRPHP41219 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRPHP41219 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.44■□□□□ 0.7
PRPHP41219 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PRPHP41219 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
PRPHP41219 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRPHP41219 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.44■□□□□ 0.7
PRPHP41219 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PRPHP41219 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PRPHP41219 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.44■□□□□ 0.7
PRPHP41219 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.44■□□□□ 0.7
PRPHP41219 AC025062.2-201ENST00000605477 670 ntBASIC19.44■□□□□ 0.7
PRPHP41219 AL139424.1-201ENST00000607572 797 ntBASIC19.44■□□□□ 0.7
PRPHP41219 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
PRPHP41219 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PRPHP41219 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
PRPHP41219 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PRPHP41219 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRPHP41219 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PRPHP41219 AC022211.2-201ENST00000585075 2527 ntBASIC19.44■□□□□ 0.7
PRPHP41219 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRPHP41219 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC19.43■□□□□ 0.7
PRPHP41219 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRPHP41219 AC012313.1-201ENST00000593393 3059 ntBASIC19.43■□□□□ 0.7
PRPHP41219 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRPHP41219 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms