Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MDH1P40925 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
MDH1P40925 AC069152.1-201ENST00000438030 544 ntBASIC17.36■□□□□ 0.37
MDH1P40925 AC113404.2-201ENST00000507884 177 ntBASIC17.36■□□□□ 0.37
MDH1P40925 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.36■□□□□ 0.37
MDH1P40925 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.36■□□□□ 0.37
MDH1P40925 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.36■□□□□ 0.37
MDH1P40925 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
MDH1P40925 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MDH1P40925 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.36■□□□□ 0.37
MDH1P40925 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
MDH1P40925 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC17.36■□□□□ 0.37
MDH1P40925 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.36■□□□□ 0.37
MDH1P40925 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
MDH1P40925 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MDH1P40925 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.36■□□□□ 0.37
MDH1P40925 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MDH1P40925 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MDH1P40925 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
MDH1P40925 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
MDH1P40925 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
MDH1P40925 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
MDH1P40925 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.35■□□□□ 0.37
MDH1P40925 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
MDH1P40925 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
MDH1P40925 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
MDH1P40925 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
MDH1P40925 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
MDH1P40925 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MDH1P40925 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.35■□□□□ 0.37
MDH1P40925 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
MDH1P40925 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MDH1P40925 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.35■□□□□ 0.37
MDH1P40925 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.35■□□□□ 0.37
MDH1P40925 DGCR10-201ENST00000609839 495 ntBASIC17.35■□□□□ 0.37
MDH1P40925 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
MDH1P40925 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.35■□□□□ 0.37
MDH1P40925 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
MDH1P40925 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC17.35■□□□□ 0.37
MDH1P40925 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MDH1P40925 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MDH1P40925 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
MDH1P40925 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
MDH1P40925 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MDH1P40925 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MDH1P40925 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MDH1P40925 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.35■□□□□ 0.37
MDH1P40925 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MDH1P40925 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.35■□□□□ 0.37
MDH1P40925 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
MDH1P40925 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MDH1P40925 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.35■□□□□ 0.37
MDH1P40925 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
MDH1P40925 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MDH1P40925 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MDH1P40925 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.35■□□□□ 0.37
MDH1P40925 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
MDH1P40925 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MDH1P40925 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.35■□□□□ 0.37
MDH1P40925 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.34■□□□□ 0.37
MDH1P40925 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MDH1P40925 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MDH1P40925 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
MDH1P40925 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MDH1P40925 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MDH1P40925 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MDH1P40925 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
MDH1P40925 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
MDH1P40925 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MDH1P40925 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
MDH1P40925 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MDH1P40925 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.34■□□□□ 0.37
MDH1P40925 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.34■□□□□ 0.37
MDH1P40925 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.34■□□□□ 0.37
MDH1P40925 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
MDH1P40925 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MDH1P40925 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MDH1P40925 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
MDH1P40925 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MDH1P40925 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
MDH1P40925 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.34■□□□□ 0.37
MDH1P40925 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MDH1P40925 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.34■□□□□ 0.37
MDH1P40925 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.34■□□□□ 0.37
MDH1P40925 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MDH1P40925 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MDH1P40925 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
MDH1P40925 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17.34■□□□□ 0.37
MDH1P40925 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MDH1P40925 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MDH1P40925 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.34■□□□□ 0.37
MDH1P40925 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.34■□□□□ 0.37
MDH1P40925 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.34■□□□□ 0.37
MDH1P40925 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
MDH1P40925 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.34■□□□□ 0.37
MDH1P40925 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.34■□□□□ 0.37
MDH1P40925 AF186192.3-201ENST00000583427 947 ntBASIC17.34■□□□□ 0.37
MDH1P40925 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MDH1P40925 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.34■□□□□ 0.37
MDH1P40925 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms