Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
COPB2P35606 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
COPB2P35606 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.65■□□□□ 0.74
COPB2P35606 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.65■□□□□ 0.74
COPB2P35606 AC006116.8-202ENST00000587620 1550 ntBASIC19.65■□□□□ 0.74
COPB2P35606 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.65■□□□□ 0.74
COPB2P35606 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.65■□□□□ 0.74
COPB2P35606 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COPB2P35606 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.65■□□□□ 0.74
COPB2P35606 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COPB2P35606 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COPB2P35606 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.65■□□□□ 0.74
COPB2P35606 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.65■□□□□ 0.74
COPB2P35606 NOC2LP2-201ENST00000407594 1944 ntBASIC19.64■□□□□ 0.74
COPB2P35606 ABALON-201ENST00000629058 1903 ntBASIC19.64■□□□□ 0.74
COPB2P35606 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
COPB2P35606 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
COPB2P35606 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COPB2P35606 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.64■□□□□ 0.73
COPB2P35606 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.64■□□□□ 0.73
COPB2P35606 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.64■□□□□ 0.73
COPB2P35606 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.64■□□□□ 0.73
COPB2P35606 FAM86C2P-203ENST00000528684 1004 ntBASIC19.64■□□□□ 0.73
COPB2P35606 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COPB2P35606 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COPB2P35606 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.64■□□□□ 0.73
COPB2P35606 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
COPB2P35606 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
COPB2P35606 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
COPB2P35606 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
COPB2P35606 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.64■□□□□ 0.73
COPB2P35606 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
COPB2P35606 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COPB2P35606 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COPB2P35606 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COPB2P35606 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
COPB2P35606 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COPB2P35606 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COPB2P35606 LTB4R2-202ENST00000528054 3092 ntBASIC19.63■□□□□ 0.73
COPB2P35606 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COPB2P35606 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COPB2P35606 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COPB2P35606 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.63■□□□□ 0.73
COPB2P35606 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COPB2P35606 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.63■□□□□ 0.73
COPB2P35606 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COPB2P35606 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.63■□□□□ 0.73
COPB2P35606 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.63■□□□□ 0.73
COPB2P35606 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COPB2P35606 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.63■□□□□ 0.73
COPB2P35606 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COPB2P35606 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
COPB2P35606 AC004461.1-201ENST00000412461 403 ntBASIC19.63■□□□□ 0.73
COPB2P35606 SLC25A6P5-201ENST00000435663 894 ntBASIC19.63■□□□□ 0.73
COPB2P35606 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.63■□□□□ 0.73
COPB2P35606 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
COPB2P35606 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.63■□□□□ 0.73
COPB2P35606 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.63■□□□□ 0.73
COPB2P35606 AC022145.2-201ENST00000598203 171 ntBASIC19.63■□□□□ 0.73
COPB2P35606 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COPB2P35606 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
COPB2P35606 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
COPB2P35606 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COPB2P35606 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COPB2P35606 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COPB2P35606 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COPB2P35606 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
COPB2P35606 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COPB2P35606 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COPB2P35606 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COPB2P35606 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COPB2P35606 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COPB2P35606 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COPB2P35606 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COPB2P35606 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COPB2P35606 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.62■□□□□ 0.73
COPB2P35606 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COPB2P35606 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
COPB2P35606 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COPB2P35606 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
COPB2P35606 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
COPB2P35606 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.62■□□□□ 0.73
COPB2P35606 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COPB2P35606 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.62■□□□□ 0.73
COPB2P35606 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.62■□□□□ 0.73
COPB2P35606 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COPB2P35606 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.62■□□□□ 0.73
COPB2P35606 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COPB2P35606 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
COPB2P35606 LINC00304-203ENST00000565008 1864 ntBASIC19.62■□□□□ 0.73
COPB2P35606 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COPB2P35606 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COPB2P35606 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COPB2P35606 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
COPB2P35606 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.62■□□□□ 0.73
COPB2P35606 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
COPB2P35606 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COPB2P35606 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.61■□□□□ 0.73
COPB2P35606 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COPB2P35606 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms