Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RORAP35398 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RORAP35398 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.39■□□□□ 0.21
RORAP35398 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.39■□□□□ 0.21
RORAP35398 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RORAP35398 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.39■□□□□ 0.21
RORAP35398 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RORAP35398 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RORAP35398 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RORAP35398 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RORAP35398 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RORAP35398 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RORAP35398 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
RORAP35398 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
RORAP35398 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.39■□□□□ 0.21
RORAP35398 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RORAP35398 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.39■□□□□ 0.21
RORAP35398 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.39■□□□□ 0.21
RORAP35398 DNAJB3-201ENST00000446806 729 ntBASIC16.39■□□□□ 0.21
RORAP35398 HCG4B-203ENST00000450128 991 ntBASIC16.39■□□□□ 0.21
RORAP35398 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.39■□□□□ 0.21
RORAP35398 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.39■□□□□ 0.21
RORAP35398 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.39■□□□□ 0.21
RORAP35398 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.39■□□□□ 0.21
RORAP35398 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RORAP35398 MIR4751-201ENST00000578027 74 ntBASIC16.39■□□□□ 0.21
RORAP35398 AC010327.4-202ENST00000591484 748 ntBASIC16.39■□□□□ 0.21
RORAP35398 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.39■□□□□ 0.21
RORAP35398 AC004790.2-201ENST00000623588 572 ntBASIC16.39■□□□□ 0.21
RORAP35398 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.39■□□□□ 0.21
RORAP35398 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RORAP35398 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RORAP35398 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RORAP35398 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RORAP35398 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RORAP35398 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RORAP35398 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RORAP35398 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
RORAP35398 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RORAP35398 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RORAP35398 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
RORAP35398 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.38■□□□□ 0.21
RORAP35398 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
RORAP35398 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RORAP35398 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RORAP35398 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RORAP35398 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RORAP35398 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RORAP35398 AL133373.2-201ENST00000623187 2828 ntBASIC16.38■□□□□ 0.21
RORAP35398 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.38■□□□□ 0.21
RORAP35398 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
RORAP35398 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.38■□□□□ 0.21
RORAP35398 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.38■□□□□ 0.21
RORAP35398 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RORAP35398 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RORAP35398 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RORAP35398 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RORAP35398 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RORAP35398 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RORAP35398 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RORAP35398 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RORAP35398 AC023274.1-201ENST00000418278 595 ntBASIC16.38■□□□□ 0.21
RORAP35398 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.38■□□□□ 0.21
RORAP35398 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.38■□□□□ 0.21
RORAP35398 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.38■□□□□ 0.21
RORAP35398 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.38■□□□□ 0.21
RORAP35398 AC055717.3-201ENST00000622967 595 ntBASIC16.38■□□□□ 0.21
RORAP35398 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RORAP35398 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.38■□□□□ 0.21
RORAP35398 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.38■□□□□ 0.21
RORAP35398 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.38■□□□□ 0.21
RORAP35398 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RORAP35398 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.38■□□□□ 0.21
RORAP35398 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RORAP35398 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RORAP35398 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RORAP35398 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RORAP35398 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.38■□□□□ 0.21
RORAP35398 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
RORAP35398 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
RORAP35398 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RORAP35398 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RORAP35398 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.37■□□□□ 0.21
RORAP35398 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RORAP35398 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RORAP35398 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RORAP35398 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.37■□□□□ 0.21
RORAP35398 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.37■□□□□ 0.21
RORAP35398 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.37■□□□□ 0.21
RORAP35398 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RORAP35398 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RORAP35398 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.37■□□□□ 0.21
RORAP35398 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
RORAP35398 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RORAP35398 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RORAP35398 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RORAP35398 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RORAP35398 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.37■□□□□ 0.21
RORAP35398 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
RORAP35398 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms