Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC104819.1-201ENST00000504587 486 ntBASIC16.38■□□□□ 0.21
PTPN6P29350 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN6P29350 AC074051.2-201ENST00000565115 352 ntBASIC16.38■□□□□ 0.21
PTPN6P29350 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.38■□□□□ 0.21
PTPN6P29350 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.38■□□□□ 0.21
PTPN6P29350 AP005901.3-202ENST00000581653 237 ntBASIC16.38■□□□□ 0.21
PTPN6P29350 STK25P1-201ENST00000585406 838 ntBASIC16.38■□□□□ 0.21
PTPN6P29350 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN6P29350 AC012313.10-201ENST00000623509 926 ntBASIC16.38■□□□□ 0.21
PTPN6P29350 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
PTPN6P29350 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN6P29350 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN6P29350 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN6P29350 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN6P29350 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN6P29350 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN6P29350 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.38■□□□□ 0.21
PTPN6P29350 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN6P29350 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN6P29350 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN6P29350 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN6P29350 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN6P29350 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PTPN6P29350 KRT8P10-201ENST00000450021 1447 ntBASIC16.37■□□□□ 0.21
PTPN6P29350 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.37■□□□□ 0.21
PTPN6P29350 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTPN6P29350 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PTPN6P29350 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.37■□□□□ 0.21
PTPN6P29350 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PTPN6P29350 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTPN6P29350 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PTPN6P29350 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
PTPN6P29350 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PTPN6P29350 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.37■□□□□ 0.21
PTPN6P29350 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTPN6P29350 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PTPN6P29350 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTPN6P29350 NUS1P1-201ENST00000446295 882 ntBASIC16.37■□□□□ 0.21
PTPN6P29350 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PTPN6P29350 KRT17P6-201ENST00000453795 1220 ntBASIC16.37■□□□□ 0.21
PTPN6P29350 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.37■□□□□ 0.21
PTPN6P29350 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.37■□□□□ 0.21
PTPN6P29350 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.37■□□□□ 0.21
PTPN6P29350 PRELID1P1-202ENST00000567272 903 ntBASIC16.37■□□□□ 0.21
PTPN6P29350 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.37■□□□□ 0.21
PTPN6P29350 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
PTPN6P29350 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PTPN6P29350 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.37■□□□□ 0.21
PTPN6P29350 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PTPN6P29350 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTPN6P29350 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PTPN6P29350 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PTPN6P29350 EGFEM1P-202ENST00000431685 1563 ntBASIC16.37■□□□□ 0.21
PTPN6P29350 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTPN6P29350 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.37■□□□□ 0.21
PTPN6P29350 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTPN6P29350 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.37■□□□□ 0.21
PTPN6P29350 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PTPN6P29350 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
PTPN6P29350 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTPN6P29350 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTPN6P29350 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTPN6P29350 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.36■□□□□ 0.21
PTPN6P29350 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PTPN6P29350 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PTPN6P29350 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTPN6P29350 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTPN6P29350 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTPN6P29350 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.36■□□□□ 0.21
PTPN6P29350 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTPN6P29350 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTPN6P29350 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
PTPN6P29350 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.36■□□□□ 0.21
PTPN6P29350 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PTPN6P29350 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PTPN6P29350 IGHV3-47-201ENST00000425060 335 ntBASIC16.36■□□□□ 0.21
PTPN6P29350 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.36■□□□□ 0.21
PTPN6P29350 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.36■□□□□ 0.21
PTPN6P29350 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.36■□□□□ 0.21
PTPN6P29350 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.36■□□□□ 0.21
PTPN6P29350 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.36■□□□□ 0.21
PTPN6P29350 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.36■□□□□ 0.21
PTPN6P29350 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.36■□□□□ 0.21
PTPN6P29350 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PTPN6P29350 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.36■□□□□ 0.21
PTPN6P29350 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTPN6P29350 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.36■□□□□ 0.21
PTPN6P29350 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PTPN6P29350 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
PTPN6P29350 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PTPN6P29350 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PTPN6P29350 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PTPN6P29350 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PTPN6P29350 AC092171.3-201ENST00000610122 2651 ntBASIC16.36■□□□□ 0.21
PTPN6P29350 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PTPN6P29350 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTPN6P29350 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTPN6P29350 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.35■□□□□ 0.21
PTPN6P29350 AL353593.2-201ENST00000602529 1483 ntBASIC16.35■□□□□ 0.21
PTPN6P29350 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms