Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.11■□□□□ 0.49
MMP8P22894 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
MMP8P22894 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
MMP8P22894 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
MMP8P22894 UNC93B7-201ENST00000509439 705 ntBASIC18.11■□□□□ 0.49
MMP8P22894 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
MMP8P22894 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
MMP8P22894 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
MMP8P22894 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
MMP8P22894 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
MMP8P22894 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MMP8P22894 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
MMP8P22894 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
MMP8P22894 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
MMP8P22894 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MMP8P22894 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MMP8P22894 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MMP8P22894 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
MMP8P22894 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
MMP8P22894 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.1■□□□□ 0.49
MMP8P22894 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.1■□□□□ 0.49
MMP8P22894 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
MMP8P22894 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
MMP8P22894 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.1■□□□□ 0.49
MMP8P22894 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
MMP8P22894 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.1■□□□□ 0.49
MMP8P22894 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MMP8P22894 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
MMP8P22894 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MMP8P22894 AP002414.1-201ENST00000391405 1147 ntBASIC18.1■□□□□ 0.49
MMP8P22894 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
MMP8P22894 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
MMP8P22894 SCARNA2-201ENST00000458748 420 ntBASIC18.1■□□□□ 0.49
MMP8P22894 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.1■□□□□ 0.49
MMP8P22894 DUX4L17-201ENST00000557360 1267 ntBASIC18.1■□□□□ 0.49
MMP8P22894 MTDHP4-201ENST00000600287 670 ntBASIC18.1■□□□□ 0.49
MMP8P22894 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
MMP8P22894 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
MMP8P22894 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
MMP8P22894 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.1■□□□□ 0.49
MMP8P22894 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
MMP8P22894 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.1■□□□□ 0.49
MMP8P22894 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.09■□□□□ 0.49
MMP8P22894 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP8P22894 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP8P22894 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MMP8P22894 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP8P22894 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.09■□□□□ 0.49
MMP8P22894 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.09■□□□□ 0.49
MMP8P22894 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.09■□□□□ 0.49
MMP8P22894 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
MMP8P22894 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MMP8P22894 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP8P22894 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP8P22894 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.09■□□□□ 0.49
MMP8P22894 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.09■□□□□ 0.49
MMP8P22894 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MMP8P22894 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MMP8P22894 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.09■□□□□ 0.49
MMP8P22894 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.09■□□□□ 0.49
MMP8P22894 AL139424.1-201ENST00000607572 797 ntBASIC18.09■□□□□ 0.49
MMP8P22894 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
MMP8P22894 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.09■□□□□ 0.49
MMP8P22894 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MMP8P22894 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP8P22894 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.09■□□□□ 0.49
MMP8P22894 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP8P22894 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MMP8P22894 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP8P22894 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MMP8P22894 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.09■□□□□ 0.49
MMP8P22894 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
MMP8P22894 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.08■□□□□ 0.49
MMP8P22894 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
MMP8P22894 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.08■□□□□ 0.49
MMP8P22894 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
MMP8P22894 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
MMP8P22894 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
MMP8P22894 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
MMP8P22894 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
MMP8P22894 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
MMP8P22894 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
MMP8P22894 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
MMP8P22894 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
MMP8P22894 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
MMP8P22894 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.08■□□□□ 0.48
MMP8P22894 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
MMP8P22894 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
MMP8P22894 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
MMP8P22894 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
MMP8P22894 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.08■□□□□ 0.48
MMP8P22894 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.08■□□□□ 0.48
MMP8P22894 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.08■□□□□ 0.48
MMP8P22894 DUSP5P1-201ENST00000441325 1139 ntBASIC18.08■□□□□ 0.48
MMP8P22894 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.08■□□□□ 0.48
MMP8P22894 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
MMP8P22894 AC021087.4-201ENST00000563761 564 ntBASIC18.08■□□□□ 0.48
MMP8P22894 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.08■□□□□ 0.48
MMP8P22894 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.08■□□□□ 0.48
MMP8P22894 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms