Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TNFRSF1BP20333 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
TNFRSF1BP20333 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TNFRSF1BP20333 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TNFRSF1BP20333 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
TNFRSF1BP20333 AL049757.1-201ENST00000616842 1596 ntBASIC16.05■□□□□ 0.16
TNFRSF1BP20333 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TNFRSF1BP20333 AC125634.1-201ENST00000438758 1403 ntBASIC16.05■□□□□ 0.16
TNFRSF1BP20333 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.05■□□□□ 0.16
TNFRSF1BP20333 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.05■□□□□ 0.16
TNFRSF1BP20333 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TNFRSF1BP20333 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.05■□□□□ 0.16
TNFRSF1BP20333 MYCLP1-201ENST00000372451 1075 ntBASIC16.05■□□□□ 0.16
TNFRSF1BP20333 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
TNFRSF1BP20333 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
TNFRSF1BP20333 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.05■□□□□ 0.16
TNFRSF1BP20333 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TNFRSF1BP20333 AL845331.1-201ENST00000424978 1190 ntBASIC16.05■□□□□ 0.16
TNFRSF1BP20333 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.05■□□□□ 0.16
TNFRSF1BP20333 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.05■□□□□ 0.16
TNFRSF1BP20333 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.05■□□□□ 0.16
TNFRSF1BP20333 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.05■□□□□ 0.16
TNFRSF1BP20333 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.05■□□□□ 0.16
TNFRSF1BP20333 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TNFRSF1BP20333 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.05■□□□□ 0.16
TNFRSF1BP20333 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.05■□□□□ 0.16
TNFRSF1BP20333 AC005336.2-201ENST00000593183 939 ntBASIC16.05■□□□□ 0.16
TNFRSF1BP20333 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.05■□□□□ 0.16
TNFRSF1BP20333 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
TNFRSF1BP20333 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TNFRSF1BP20333 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
TNFRSF1BP20333 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TNFRSF1BP20333 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.05■□□□□ 0.16
TNFRSF1BP20333 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TNFRSF1BP20333 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TNFRSF1BP20333 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
TNFRSF1BP20333 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TNFRSF1BP20333 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TNFRSF1BP20333 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.05■□□□□ 0.16
TNFRSF1BP20333 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TNFRSF1BP20333 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TNFRSF1BP20333 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TNFRSF1BP20333 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TNFRSF1BP20333 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.04■□□□□ 0.16
TNFRSF1BP20333 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TNFRSF1BP20333 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TNFRSF1BP20333 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.04■□□□□ 0.16
TNFRSF1BP20333 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TNFRSF1BP20333 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TNFRSF1BP20333 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TNFRSF1BP20333 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TNFRSF1BP20333 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.04■□□□□ 0.16
TNFRSF1BP20333 KRT8P10-201ENST00000450021 1447 ntBASIC16.04■□□□□ 0.16
TNFRSF1BP20333 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.04■□□□□ 0.16
TNFRSF1BP20333 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TNFRSF1BP20333 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.04■□□□□ 0.16
TNFRSF1BP20333 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
TNFRSF1BP20333 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.04■□□□□ 0.16
TNFRSF1BP20333 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TNFRSF1BP20333 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TNFRSF1BP20333 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TNFRSF1BP20333 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.04■□□□□ 0.16
TNFRSF1BP20333 AC104076.2-201ENST00000448912 469 ntBASIC16.04■□□□□ 0.16
TNFRSF1BP20333 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.04■□□□□ 0.16
TNFRSF1BP20333 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.04■□□□□ 0.16
TNFRSF1BP20333 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.04■□□□□ 0.16
TNFRSF1BP20333 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.04■□□□□ 0.16
TNFRSF1BP20333 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.04■□□□□ 0.16
TNFRSF1BP20333 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.04■□□□□ 0.16
TNFRSF1BP20333 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
TNFRSF1BP20333 AL592071.1-201ENST00000611956 408 ntBASIC16.04■□□□□ 0.16
TNFRSF1BP20333 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.04■□□□□ 0.16
TNFRSF1BP20333 AC124864.1-201ENST00000623408 392 ntBASIC16.04■□□□□ 0.16
TNFRSF1BP20333 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TNFRSF1BP20333 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TNFRSF1BP20333 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TNFRSF1BP20333 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.04■□□□□ 0.16
TNFRSF1BP20333 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TNFRSF1BP20333 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TNFRSF1BP20333 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TNFRSF1BP20333 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TNFRSF1BP20333 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TNFRSF1BP20333 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TNFRSF1BP20333 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TNFRSF1BP20333 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TNFRSF1BP20333 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TNFRSF1BP20333 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TNFRSF1BP20333 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TNFRSF1BP20333 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
TNFRSF1BP20333 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TNFRSF1BP20333 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.03■□□□□ 0.16
TNFRSF1BP20333 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.03■□□□□ 0.16
TNFRSF1BP20333 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TNFRSF1BP20333 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TNFRSF1BP20333 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TNFRSF1BP20333 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TNFRSF1BP20333 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TNFRSF1BP20333 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.03■□□□□ 0.16
TNFRSF1BP20333 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TNFRSF1BP20333 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms